Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736439

Identifier: 187736439

GI number: 187736439

Start: 2372975

End: 2374396

Strand: Direct

Name: 187736439

Synonym: Amuc_1957

Alternate gene names: NA

Gene position: 2372975-2374396 (Clockwise)

Preceding gene: 187736433

Following gene: 187736440

Centisome position: 89.07

GC content: 58.37

Gene sequence:

>1422_bases
ATGGAAGATTATCGTGTCCGGAGAAGCCTTGGAGAACATGTCCTGCGCTGCTCCGTCCTGATTGCTGCGCTCTTCATCAT
GTCTCTGGGCATCGCTCTGTCCACCAAGGCAGACCTGGGAGTCTCCCCCATCTCCTGCACGCCCTATGTGCTCAGCCTGG
CATTCCCTCTAACCATGGGGACCGTCACCATCCTCATGCACCTGAGCTTTGTGGCCGTGCAGGCGGCCCTGCTGAAAAGG
CAATTCCGTCCGGCGCATCTGCTCCAGATTCCCATAGCTTTTATCTTCGGCTTTCTGACGGATTTTTCCATGTGGATCAT
AGCGCCTCTGGAACCGGACGGATACCTGTGGTCCGTTATTCTCTGCCTGTTCAGCTGCGTGGTAATCGGATTCGGCGTCT
TTCTTCAGGTTAAGGCGGATTCCGTTCTTCTGGCAGGGGAAGGCATGAGCCTGGCCTTCGTCAAACTCTTCAAATGGGAA
TTCGGAGCCGTAAAAACCGGGATGGACTGCACGCTCGTCTGCATCGGCCTGGCCTGTTCCCTCATCTTCCTGCCCGGACT
GACAGGCATACGGGAAGGAACCGTGGTGGCCGCCGTCCTGGTGGGAATGATCGTCCGTTTTTTCAACAGGCACGTCTTCT
GGCCGGACAGGCTCCTGGAACGGCTGGCGCGCCCCGGAGCAGCAAGCGAGCTTCCTCCGCTGGCACAAACGGCCGCTTAT
GCTCCGGACGCCCCTCTGGTCATTTCCATTGACCGGGAATACGGTTCCGGCGGCCATGCCATCGGGAAAATGCTGGCGGA
AAAGCTGGGCATCCGATTCTACGACTCGGAACTGGTGTACCTCACAGCCTCCCGGAGCGGCCTCACTCCGGACTACATCC
GCAAGCACGAACAACAGCTTTCCAGCCGCTTCCTGCACGAACTTTACGCCCAGAACTATGCCTACACGGCGGAGGAAATG
CCCCCTGAAGACGCCACCTTCCTGGCACAGAGCAAAGTCATCCGGGACATTACGGCCAGTCAGGCATGCGTCATCGTGGG
CCGCTGCGCCAACTTCATCCTGAAAGGGAGACCCAACCTGTTCAGTGTTTTCCTTCATGCGGACCGGGCCACGCGCATGC
AGCGCGTTATTGAAAACTATGGGGTAGAACCTGGCGGGGCAGCCCGGGCCATGGACATCATGGACTCCCGCCGCCGCACC
CACTGCCTGCACTACACCGGGCAGGAACTGGGCAATGCACGCCTCTACGACTTGTGCGTCAACACGTCCGATTACGGACT
GAAACGCACGGTGGAACTGATTCTGGAAGCCATCAATACCAGAACCGAACAATCTTCCGCTGTAGAAACGGTTCCCGTCC
GCTCCGCATCTTTTCCCGAACCGGAAGAGGACAGCATTCCCGGAGAAATATCCCTCGCCTGA

Upstream 100 bases:

>100_bases
ATTTCAGAAACGGAGGACGGCGAAAAAGAAAAAGGAAAAAACGCCTCATTTCCTCAGAACCCTTGACTTGCCGCTGGCAG
AAAAGATAACATCCGGTATC

Downstream 100 bases:

>100_bases
CAGGGGCAAATGTCTCCAACAGCCAATACTTATGTAACAACTGCCCTCCCGGCACCTTGTTCACCGGTAACAGAATCCGT
TGTCTGAAAAAACTGCCTGG

Product: membrane protein-like protein

Products: NA

Alternate protein names: Integral Membrane Protein; Biotin Carboxylase

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MEDYRVRRSLGEHVLRCSVLIAALFIMSLGIALSTKADLGVSPISCTPYVLSLAFPLTMGTVTILMHLSFVAVQAALLKR
QFRPAHLLQIPIAFIFGFLTDFSMWIIAPLEPDGYLWSVILCLFSCVVIGFGVFLQVKADSVLLAGEGMSLAFVKLFKWE
FGAVKTGMDCTLVCIGLACSLIFLPGLTGIREGTVVAAVLVGMIVRFFNRHVFWPDRLLERLARPGAASELPPLAQTAAY
APDAPLVISIDREYGSGGHAIGKMLAEKLGIRFYDSELVYLTASRSGLTPDYIRKHEQQLSSRFLHELYAQNYAYTAEEM
PPEDATFLAQSKVIRDITASQACVIVGRCANFILKGRPNLFSVFLHADRATRMQRVIENYGVEPGGAARAMDIMDSRRRT
HCLHYTGQELGNARLYDLCVNTSDYGLKRTVELILEAINTRTEQSSAVETVPVRSASFPEPEEDSIPGEISLA

Sequences:

>Translated_473_residues
MEDYRVRRSLGEHVLRCSVLIAALFIMSLGIALSTKADLGVSPISCTPYVLSLAFPLTMGTVTILMHLSFVAVQAALLKR
QFRPAHLLQIPIAFIFGFLTDFSMWIIAPLEPDGYLWSVILCLFSCVVIGFGVFLQVKADSVLLAGEGMSLAFVKLFKWE
FGAVKTGMDCTLVCIGLACSLIFLPGLTGIREGTVVAAVLVGMIVRFFNRHVFWPDRLLERLARPGAASELPPLAQTAAY
APDAPLVISIDREYGSGGHAIGKMLAEKLGIRFYDSELVYLTASRSGLTPDYIRKHEQQLSSRFLHELYAQNYAYTAEEM
PPEDATFLAQSKVIRDITASQACVIVGRCANFILKGRPNLFSVFLHADRATRMQRVIENYGVEPGGAARAMDIMDSRRRT
HCLHYTGQELGNARLYDLCVNTSDYGLKRTVELILEAINTRTEQSSAVETVPVRSASFPEPEEDSIPGEISLA
>Mature_473_residues
MEDYRVRRSLGEHVLRCSVLIAALFIMSLGIALSTKADLGVSPISCTPYVLSLAFPLTMGTVTILMHLSFVAVQAALLKR
QFRPAHLLQIPIAFIFGFLTDFSMWIIAPLEPDGYLWSVILCLFSCVVIGFGVFLQVKADSVLLAGEGMSLAFVKLFKWE
FGAVKTGMDCTLVCIGLACSLIFLPGLTGIREGTVVAAVLVGMIVRFFNRHVFWPDRLLERLARPGAASELPPLAQTAAY
APDAPLVISIDREYGSGGHAIGKMLAEKLGIRFYDSELVYLTASRSGLTPDYIRKHEQQLSSRFLHELYAQNYAYTAEEM
PPEDATFLAQSKVIRDITASQACVIVGRCANFILKGRPNLFSVFLHADRATRMQRVIENYGVEPGGAARAMDIMDSRRRT
HCLHYTGQELGNARLYDLCVNTSDYGLKRTVELILEAINTRTEQSSAVETVPVRSASFPEPEEDSIPGEISLA

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52130; Mature: 52130

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDYRVRRSLGEHVLRCSVLIAALFIMSLGIALSTKADLGVSPISCTPYVLSLAFPLTMG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCHHHHHHHHHHHHH
TVTILMHLSFVAVQAALLKRQFRPAHLLQIPIAFIFGFLTDFSMWIIAPLEPDGYLWSVI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LCLFSCVVIGFGVFLQVKADSVLLAGEGMSLAFVKLFKWEFGAVKTGMDCTLVCIGLACS
HHHHHHHHHHHHHEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LIFLPGLTGIREGTVVAAVLVGMIVRFFNRHVFWPDRLLERLARPGAASELPPLAQTAAY
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCC
APDAPLVISIDREYGSGGHAIGKMLAEKLGIRFYDSELVYLTASRSGLTPDYIRKHEQQL
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCEEEEEEECCCCCCHHHHHHHHHHH
SSRFLHELYAQNYAYTAEEMPPEDATFLAQSKVIRDITASQACVIVGRCANFILKGRPNL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
FSVFLHADRATRMQRVIENYGVEPGGAARAMDIMDSRRRTHCLHYTGQELGNARLYDLCV
EEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHCCCEEEEEEE
NTSDYGLKRTVELILEAINTRTEQSSAVETVPVRSASFPEPEEDSIPGEISLA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MEDYRVRRSLGEHVLRCSVLIAALFIMSLGIALSTKADLGVSPISCTPYVLSLAFPLTMG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCHHHHHHHHHHHHH
TVTILMHLSFVAVQAALLKRQFRPAHLLQIPIAFIFGFLTDFSMWIIAPLEPDGYLWSVI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LCLFSCVVIGFGVFLQVKADSVLLAGEGMSLAFVKLFKWEFGAVKTGMDCTLVCIGLACS
HHHHHHHHHHHHHEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LIFLPGLTGIREGTVVAAVLVGMIVRFFNRHVFWPDRLLERLARPGAASELPPLAQTAAY
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCC
APDAPLVISIDREYGSGGHAIGKMLAEKLGIRFYDSELVYLTASRSGLTPDYIRKHEQQL
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCEEEEEEECCCCCCHHHHHHHHHHH
SSRFLHELYAQNYAYTAEEMPPEDATFLAQSKVIRDITASQACVIVGRCANFILKGRPNL
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
FSVFLHADRATRMQRVIENYGVEPGGAARAMDIMDSRRRTHCLHYTGQELGNARLYDLCV
EEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHCCCEEEEEEE
NTSDYGLKRTVELILEAINTRTEQSSAVETVPVRSASFPEPEEDSIPGEISLA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA