Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736427
Identifier: 187736427
GI number: 187736427
Start: 2362361
End: 2363917
Strand: Direct
Name: 187736427
Synonym: Amuc_1945
Alternate gene names: NA
Gene position: 2362361-2363917 (Clockwise)
Preceding gene: 187736426
Following gene: 187736428
Centisome position: 88.67
GC content: 57.48
Gene sequence:
>1557_bases ATGAAATTCAGGGGAACATGCGTCTTTCTGTTGACGGCTCTTCTTCTGCTCCCTGCCGGCCGGGGACAGGAACGAAAGGA GCCTGGCAATGATTCTTCCGCGGAAGTGCGGCAGACGGAAGAAGAATCAGCATCCGTCCAGGATGCGGATTTTATTGATG ACGCCTCGGACCGTCCAGTATTGCAGGGCAGTTCCAATGTAAACCCCGTCGTTCCCCCTTCACCTTCGGCAAGGACCGCC GCCGGAGCGGAGGAACAGCCCGCCAAAAGGCAGCCGTTCACCAGCGTTTCCACCTCCAAGCAATTCCACGTCACCGGGAT GGACTCCCTGCTGGCCGGGGCCATCGCCACCCGGGCGGATGCCATACGCACCGCGCTGCTAAAAGTCCTCAAGCAGCCTG ACGAATGGAAAAACGGCATCAACATCCGCCTGGTAGGAGAGCCGGGAAGCCCCGTTCCGGCCAACCCCGTCCGCATGCAA ACCGTCATTGTAGGCAATACCCTCTCCTATAGCATTTTCATTCATCTGGGCCACGGCATCAACCAGGACAGCCTGCGCCG CGCCATCGTCTCCACCCTGCTTTATGAAATGATGCTGCGCACAGTGGACCCGGAAGGCCTGCCGGACAACGTCACGCTGC CCCCCTGGCTGATTGCCGGGTTGGAACAGGCTGTTCTGTGGCACAATAATGAAGCTGACCGTGCCATGTATTCCACCCTG TTCCAGCAGTCCGGAATTATGACTCCGGAAGAAATCCTGAATTGCCGGGAACCGGAAAAGGAACTGGATGCGACCTCTTA CGCGGCCTATCAAACTTCCTGTGGAGCCCTGGTGCTTTGCCTGCTGAACCAGGAAAACGGTCCGGAAGGGATGAAACAGC TTCTGGACCAGGCTATTCTGGGCAATGACGATCCCAGAAACCTCATCAAACGCCATTTTCCGCAGCTCAGCCTGACCCCC ACTTCCCTCCATAAATGGTGGACGCTTCAGCTTTCCCGCATGGCGACGCCTCCCCTGACGGAAACTCTCACGATTACGGA AACGGAACGTCATCTCCAGGAAGCCCTTACCCTGGTCAAGTATGATCCGGATACCCGCACCACCGTCACATTTCCCCTGG ATGACCTGGAACAGGCCCGTTCCCTGCCGGATCTGAACAGGCAGCTTTCCAACGTGGCTGGCAGCCTGCTCAACCTCAGC AGGCGTTCCTTTCCTTCATACCGGCCCGTCATTGTAGAATATGCCAAGCTGGTGGCCCTGATGCAAACAGGGAAAGTCAA CAGCCGGGAAGCCGTCCCCAAAATCAGCCAGCTTCGGGAAATAAGAAACCTTTCCATGAAAACCGCCCGCCGCGTCCGGG ACTATATGGACTGGTATGAAATCAACACGCGGTCCGGAACCGGCAAGACATTCGCTTCCTACGCGGCAGCCGTGAAAATC CTCCGGGAACAGGAACAGCCGGCCAATACCCCTGTTTCCCGCTACTTGGACGACATTGAAAAACTGTACACCCTCCCGGC CAGGGCTCCCGTGCCCTCCCTGCATGGGAAGGATTAA
Upstream 100 bases:
>100_bases CGCCCTGGTTTCCTCCATCATGGGGAGGCTGTGCCGGGAAGGTCGCGCGGAAGAGGATTTCAGCTGTCTGGCGGAACAAT TCGACTAACTTTTTCCGTTG
Downstream 100 bases:
>100_bases GGAATTAAGGAAAGGCGTTCTGCGGCGGAACCATCCTGCCGTCCCCATCAAGAGCGCCGCACTTCTAAAAAAACGGCTTC CTGTGCCGTGCAATGTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MKFRGTCVFLLTALLLLPAGRGQERKEPGNDSSAEVRQTEEESASVQDADFIDDASDRPVLQGSSNVNPVVPPSPSARTA AGAEEQPAKRQPFTSVSTSKQFHVTGMDSLLAGAIATRADAIRTALLKVLKQPDEWKNGINIRLVGEPGSPVPANPVRMQ TVIVGNTLSYSIFIHLGHGINQDSLRRAIVSTLLYEMMLRTVDPEGLPDNVTLPPWLIAGLEQAVLWHNNEADRAMYSTL FQQSGIMTPEEILNCREPEKELDATSYAAYQTSCGALVLCLLNQENGPEGMKQLLDQAILGNDDPRNLIKRHFPQLSLTP TSLHKWWTLQLSRMATPPLTETLTITETERHLQEALTLVKYDPDTRTTVTFPLDDLEQARSLPDLNRQLSNVAGSLLNLS RRSFPSYRPVIVEYAKLVALMQTGKVNSREAVPKISQLREIRNLSMKTARRVRDYMDWYEINTRSGTGKTFASYAAAVKI LREQEQPANTPVSRYLDDIEKLYTLPARAPVPSLHGKD
Sequences:
>Translated_518_residues MKFRGTCVFLLTALLLLPAGRGQERKEPGNDSSAEVRQTEEESASVQDADFIDDASDRPVLQGSSNVNPVVPPSPSARTA AGAEEQPAKRQPFTSVSTSKQFHVTGMDSLLAGAIATRADAIRTALLKVLKQPDEWKNGINIRLVGEPGSPVPANPVRMQ TVIVGNTLSYSIFIHLGHGINQDSLRRAIVSTLLYEMMLRTVDPEGLPDNVTLPPWLIAGLEQAVLWHNNEADRAMYSTL FQQSGIMTPEEILNCREPEKELDATSYAAYQTSCGALVLCLLNQENGPEGMKQLLDQAILGNDDPRNLIKRHFPQLSLTP TSLHKWWTLQLSRMATPPLTETLTITETERHLQEALTLVKYDPDTRTTVTFPLDDLEQARSLPDLNRQLSNVAGSLLNLS RRSFPSYRPVIVEYAKLVALMQTGKVNSREAVPKISQLREIRNLSMKTARRVRDYMDWYEINTRSGTGKTFASYAAAVKI LREQEQPANTPVSRYLDDIEKLYTLPARAPVPSLHGKD >Mature_518_residues MKFRGTCVFLLTALLLLPAGRGQERKEPGNDSSAEVRQTEEESASVQDADFIDDASDRPVLQGSSNVNPVVPPSPSARTA AGAEEQPAKRQPFTSVSTSKQFHVTGMDSLLAGAIATRADAIRTALLKVLKQPDEWKNGINIRLVGEPGSPVPANPVRMQ TVIVGNTLSYSIFIHLGHGINQDSLRRAIVSTLLYEMMLRTVDPEGLPDNVTLPPWLIAGLEQAVLWHNNEADRAMYSTL FQQSGIMTPEEILNCREPEKELDATSYAAYQTSCGALVLCLLNQENGPEGMKQLLDQAILGNDDPRNLIKRHFPQLSLTP TSLHKWWTLQLSRMATPPLTETLTITETERHLQEALTLVKYDPDTRTTVTFPLDDLEQARSLPDLNRQLSNVAGSLLNLS RRSFPSYRPVIVEYAKLVALMQTGKVNSREAVPKISQLREIRNLSMKTARRVRDYMDWYEINTRSGTGKTFASYAAAVKI LREQEQPANTPVSRYLDDIEKLYTLPARAPVPSLHGKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57533; Mature: 57533
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRGTCVFLLTALLLLPAGRGQERKEPGNDSSAEVRQTEEESASVQDADFIDDASDRPV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE LQGSSNVNPVVPPSPSARTAAGAEEQPAKRQPFTSVSTSKQFHVTGMDSLLAGAIATRAD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH AIRTALLKVLKQPDEWKNGINIRLVGEPGSPVPANPVRMQTVIVGNTLSYSIFIHLGHGI HHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCC NQDSLRRAIVSTLLYEMMLRTVDPEGLPDNVTLPPWLIAGLEQAVLWHNNEADRAMYSTL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH FQQSGIMTPEEILNCREPEKELDATSYAAYQTSCGALVLCLLNQENGPEGMKQLLDQAIL HHHCCCCCHHHHHCCCCCHHHHCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHC GNDDPRNLIKRHFPQLSLTPTSLHKWWTLQLSRMATPPLTETLTITETERHLQEALTLVK CCCCHHHHHHHHCCCCCCCHHHHHHHHEEEHHHCCCCCCCCEEEECHHHHHHHHHHHHHE YDPDTRTTVTFPLDDLEQARSLPDLNRQLSNVAGSLLNLSRRSFPSYRPVIVEYAKLVAL ECCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MQTGKVNSREAVPKISQLREIRNLSMKTARRVRDYMDWYEINTRSGTGKTFASYAAAVKI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH LREQEQPANTPVSRYLDDIEKLYTLPARAPVPSLHGKD HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKFRGTCVFLLTALLLLPAGRGQERKEPGNDSSAEVRQTEEESASVQDADFIDDASDRPV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCE LQGSSNVNPVVPPSPSARTAAGAEEQPAKRQPFTSVSTSKQFHVTGMDSLLAGAIATRAD ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH AIRTALLKVLKQPDEWKNGINIRLVGEPGSPVPANPVRMQTVIVGNTLSYSIFIHLGHGI HHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCC NQDSLRRAIVSTLLYEMMLRTVDPEGLPDNVTLPPWLIAGLEQAVLWHNNEADRAMYSTL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH FQQSGIMTPEEILNCREPEKELDATSYAAYQTSCGALVLCLLNQENGPEGMKQLLDQAIL HHHCCCCCHHHHHCCCCCHHHHCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHC GNDDPRNLIKRHFPQLSLTPTSLHKWWTLQLSRMATPPLTETLTITETERHLQEALTLVK CCCCHHHHHHHHCCCCCCCHHHHHHHHEEEHHHCCCCCCCCEEEECHHHHHHHHHHHHHE YDPDTRTTVTFPLDDLEQARSLPDLNRQLSNVAGSLLNLSRRSFPSYRPVIVEYAKLVAL ECCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MQTGKVNSREAVPKISQLREIRNLSMKTARRVRDYMDWYEINTRSGTGKTFASYAAAVKI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH LREQEQPANTPVSRYLDDIEKLYTLPARAPVPSLHGKD HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA