Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736422
Identifier: 187736422
GI number: 187736422
Start: 2354996
End: 2355451
Strand: Reverse
Name: 187736422
Synonym: Amuc_1940
Alternate gene names: NA
Gene position: 2355451-2354996 (Counterclockwise)
Preceding gene: 187736423
Following gene: 187736421
Centisome position: 88.41
GC content: 52.19
Gene sequence:
>456_bases ATGGAAAACCAGCATCTCAGCCTTTTGGACCGTGTGTACACCGTTCTCAGAAAGAGAGGGGAAGAAACGGAATGGATTAC TTCCGCTGATGACCACAACATTAAGACAGGCATCGCATTCGTCCCCTGTGATACGTTCACCCCGGTGAGCCTCCTGTACA CCATGATTGAACGTCCGGAGACGCTGGTCATTGACGTGCTTTTTGCCGCCAAGGTTCCTGAAAACCGCCGTGTGGAAATC AGCATTATCCTCAGCGAACTGAACGCGGACCAGACGGCCGGCGCCTTTCAGCTGGACCCCAACAGCGGGTATGTTTATTA CCGTCAGTCCTTCGTTCTGGAAGGCATGGACCTCACGGAAGCCCAGTTTGCCCAGTTGATGAAGAATATTGAAACCGTGG CTGTGGAAACGGCGGAGGCCTATTCTCACATCATGGAGACGGAATATCCCAAATAA
Upstream 100 bases:
>100_bases CTTGACGAATCAGAAGGATGCCAGTAAGCTTGAATTCAGTAAACGGGCGCGTACGTTGCATGCGCCTTTGCAAGCAACCC CCTGTTAAACAATTTTCAAT
Downstream 100 bases:
>100_bases CGGGACGCGTTTCCCCCGGAACTGTTGATGAGCGAGGCCCCTCAAAAAAAGGGAACGTCCTGGTCCATAGGCATCGGCCT GGGGATTGTGGCGCTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK
Sequences:
>Translated_151_residues MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK >Mature_151_residues MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17212; Mature: 17212
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPE CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC TLVIDVLFAAKVPENRRVEISIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTE EEEEEEEHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCH AQFAQLMKNIETVAVETAEAYSHIMETEYPK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPE CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC TLVIDVLFAAKVPENRRVEISIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTE EEEEEEEHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCH AQFAQLMKNIETVAVETAEAYSHIMETEYPK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA