Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736422

Identifier: 187736422

GI number: 187736422

Start: 2354996

End: 2355451

Strand: Reverse

Name: 187736422

Synonym: Amuc_1940

Alternate gene names: NA

Gene position: 2355451-2354996 (Counterclockwise)

Preceding gene: 187736423

Following gene: 187736421

Centisome position: 88.41

GC content: 52.19

Gene sequence:

>456_bases
ATGGAAAACCAGCATCTCAGCCTTTTGGACCGTGTGTACACCGTTCTCAGAAAGAGAGGGGAAGAAACGGAATGGATTAC
TTCCGCTGATGACCACAACATTAAGACAGGCATCGCATTCGTCCCCTGTGATACGTTCACCCCGGTGAGCCTCCTGTACA
CCATGATTGAACGTCCGGAGACGCTGGTCATTGACGTGCTTTTTGCCGCCAAGGTTCCTGAAAACCGCCGTGTGGAAATC
AGCATTATCCTCAGCGAACTGAACGCGGACCAGACGGCCGGCGCCTTTCAGCTGGACCCCAACAGCGGGTATGTTTATTA
CCGTCAGTCCTTCGTTCTGGAAGGCATGGACCTCACGGAAGCCCAGTTTGCCCAGTTGATGAAGAATATTGAAACCGTGG
CTGTGGAAACGGCGGAGGCCTATTCTCACATCATGGAGACGGAATATCCCAAATAA

Upstream 100 bases:

>100_bases
CTTGACGAATCAGAAGGATGCCAGTAAGCTTGAATTCAGTAAACGGGCGCGTACGTTGCATGCGCCTTTGCAAGCAACCC
CCTGTTAAACAATTTTCAAT

Downstream 100 bases:

>100_bases
CGGGACGCGTTTCCCCCGGAACTGTTGATGAGCGAGGCCCCTCAAAAAAAGGGAACGTCCTGGTCCATAGGCATCGGCCT
GGGGATTGTGGCGCTTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI
SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK

Sequences:

>Translated_151_residues
MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI
SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK
>Mature_151_residues
MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPETLVIDVLFAAKVPENRRVEI
SIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTEAQFAQLMKNIETVAVETAEAYSHIMETEYPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17212; Mature: 17212

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPE
CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
TLVIDVLFAAKVPENRRVEISIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTE
EEEEEEEHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCH
AQFAQLMKNIETVAVETAEAYSHIMETEYPK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENQHLSLLDRVYTVLRKRGEETEWITSADDHNIKTGIAFVPCDTFTPVSLLYTMIERPE
CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
TLVIDVLFAAKVPENRRVEISIILSELNADQTAGAFQLDPNSGYVYYRQSFVLEGMDLTE
EEEEEEEHHHCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCH
AQFAQLMKNIETVAVETAEAYSHIMETEYPK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA