Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736405

Identifier: 187736405

GI number: 187736405

Start: 2334124

End: 2334567

Strand: Direct

Name: 187736405

Synonym: Amuc_1923

Alternate gene names: NA

Gene position: 2334124-2334567 (Clockwise)

Preceding gene: 187736404

Following gene: 187736406

Centisome position: 87.61

GC content: 59.91

Gene sequence:

>444_bases
ATGTCCTCCCCCTGGTTTCCCTACACGCCGGACAGAGACCGTCCGGATCCCCACGCCTCCCCCGTCCGGTATGATTATCT
TTCCCGTGACGAGCAGGAGGTGAGGCAGGCGCTGGCGGACTGGTTCCAGATATCCCCCGCCACCAGTGAAACACGTAACC
TCCATACGGCGGAATCCCTGCTGGGGGATATTCTGTCCAGGCTTCCCCTGGACGGCGACGGGATGGATCCCGAATTGCTC
CGGGCAGGATGGCTGAAAGCTGCGGGGCCATTCCTGGGCCAGCAATCCAACCTTCTTTCCATTGTCAAGGGAGTGGCCAC
CATCCAGGTGCTTCAACCAGCCATGCGCTACCATCTCCAGCAGTGGCAGGGAGCCCTGCTGGGAAAACTGAAGGACCAGT
TCGGCAAGGACGCCGTTCATTCCATCCGCATAAGGATAGGATAA

Upstream 100 bases:

>100_bases
TGGAAGCGATTGGCGACGACGGCGAATAATATTTCTCCATATATTATTTTAACCGCCCGGGGCTGTTGGCATTCAACGCT
CCGGGCTTTTATTTTCCCCC

Downstream 100 bases:

>100_bases
TTTTATACTGCGTAAAATGTTTTCTTTTGCAATTTCCCTGTTTCTTTGAAAGATCATTCATCATCCACGTGTAATATTTG
CCATGCGATTATCCCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSSPWFPYTPDRDRPDPHASPVRYDYLSRDEQEVRQALADWFQISPATSETRNLHTAESLLGDILSRLPLDGDGMDPELL
RAGWLKAAGPFLGQQSNLLSIVKGVATIQVLQPAMRYHLQQWQGALLGKLKDQFGKDAVHSIRIRIG

Sequences:

>Translated_147_residues
MSSPWFPYTPDRDRPDPHASPVRYDYLSRDEQEVRQALADWFQISPATSETRNLHTAESLLGDILSRLPLDGDGMDPELL
RAGWLKAAGPFLGQQSNLLSIVKGVATIQVLQPAMRYHLQQWQGALLGKLKDQFGKDAVHSIRIRIG
>Mature_146_residues
SSPWFPYTPDRDRPDPHASPVRYDYLSRDEQEVRQALADWFQISPATSETRNLHTAESLLGDILSRLPLDGDGMDPELLR
AGWLKAAGPFLGQQSNLLSIVKGVATIQVLQPAMRYHLQQWQGALLGKLKDQFGKDAVHSIRIRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16519; Mature: 16388

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPWFPYTPDRDRPDPHASPVRYDYLSRDEQEVRQALADWFQISPATSETRNLHTAESL
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LGDILSRLPLDGDGMDPELLRAGWLKAAGPFLGQQSNLLSIVKGVATIQVLQPAMRYHLQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QWQGALLGKLKDQFGKDAVHSIRIRIG
HHHHHHHHHHHHHHCHHHHHHHHEECC
>Mature Secondary Structure 
SSPWFPYTPDRDRPDPHASPVRYDYLSRDEQEVRQALADWFQISPATSETRNLHTAESL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LGDILSRLPLDGDGMDPELLRAGWLKAAGPFLGQQSNLLSIVKGVATIQVLQPAMRYHLQ
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QWQGALLGKLKDQFGKDAVHSIRIRIG
HHHHHHHHHHHHHHCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA