Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nlaIIIM [H]
Identifier: 187736388
GI number: 187736388
Start: 2310879
End: 2311973
Strand: Direct
Name: nlaIIIM [H]
Synonym: Amuc_1905
Alternate gene names: 187736388
Gene position: 2310879-2311973 (Clockwise)
Preceding gene: 187736386
Following gene: 187736389
Centisome position: 86.74
GC content: 53.24
Gene sequence:
>1095_bases ATGGAGGAAGATCCCAGATTCCTGACGGAACAAATTGTAACCTATTTGGGCAATAAGCGTTCCCTTCTTCATTTTCTGGG GACGGGGCTGGAACAGGTGAAAAAACGCCTGGGTAAGGAAAGGCTGAAAGCAGGGGATCTTTTTTCCGGCAGCGGCATTG TGGCGCGTTTTCTGAAACAGCATTCGGAAGACTTGATCGTCAATGATCTGGAGGAATACAGCCGGGTCGTCAATACCTGT TACCTGAGCAACGCGGAGGAAGTGGAAAATCTGGAGCTGGACAGACATTACAGACGCCTGCTGCGGTATATGGAAACGCA TGAATCCCCTGGCTTCATCACGGAACTGTACGCTCCCAGAAATCCGGACTGCATCACGGCGGATGACCGCGTTTTCTATA CGCGCCGCAACGCCGTGTACCTGGATACGGCGAGGCAGACCATCAATTTGCTTCCGGCAGAAGTCAGGCCCTATTTTATC GCTCCTCTTCTGGCGGAAGCTTCCGTCCACACAAACACATCCGGCGTATTCAAAGGTTTTTACAAAGACAGGAACGGAAT CGGCAAATTCGGGGGAACGGGAGGCAACGCCCTTTCCCGCATTCTGGGAGAAATTTCGCTGCCGTTTCCCGTGTTTTCCC GGTTTGACTGCCGGTATTCCATCCATTGCCGTGACGCCAATGAACTGGCTGCCGAGCTGCCGGAAATGGATGTGGTGTAC CTGGACCCTCCCTATAACCAGCATCCGTACGGTTCCAATTATTTCATGCTGAATTTGCTGTCTTCTTATGAAAAGCCGGA GGAAACCAGCCGAGTTTCCGGCATTCCCGCAGATTGGAAACGTTCCACGTACAATAGCCGCCAGCATGCTCCGGAGGCCC TGTTCCGGCTGCTGGAGGATTGCCCGGCCAAATTTATTCTGCTTTCCTACAGCTCGGAGGGGTTCATCAACTATGAGGAG ATGACCGGTTTCCTTGGACGCCTGGGCCATACCGTTACGCTGGAAACGCCGTACGCCGCGTTCCGGGGCAGCCGGAATTT CAGAAACCGTCCTCAGAACGTGACGGAATTCCTGTTCCTGGTGGAACGGTTTTAA
Upstream 100 bases:
>100_bases CGCACCCCGGAGCAACTTGACGGAAAGTCCGGAGTGCCGTATGCTGGACGGGACCTGCTATATGACCCGGAACGAGCCAT CATCCCTTCCAGCTCCGCAG
Downstream 100 bases:
>100_bases CAGATGACAGGAAAAGCAGCCTCCATGCAAACTCATTTGGAACGCTTCATCCGTTTTCTGGCCGCGGAGAAAGGCCTGAG CACCGCCTACCAGCTTTCCG
Product: Site-specific DNA-methyltransferase (adenine-specific)
Products: NA
Alternate protein names: M.NlaIII; Adenine-specific methyltransferase NlaIII [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MEEDPRFLTEQIVTYLGNKRSLLHFLGTGLEQVKKRLGKERLKAGDLFSGSGIVARFLKQHSEDLIVNDLEEYSRVVNTC YLSNAEEVENLELDRHYRRLLRYMETHESPGFITELYAPRNPDCITADDRVFYTRRNAVYLDTARQTINLLPAEVRPYFI APLLAEASVHTNTSGVFKGFYKDRNGIGKFGGTGGNALSRILGEISLPFPVFSRFDCRYSIHCRDANELAAELPEMDVVY LDPPYNQHPYGSNYFMLNLLSSYEKPEETSRVSGIPADWKRSTYNSRQHAPEALFRLLEDCPAKFILLSYSSEGFINYEE MTGFLGRLGHTVTLETPYAAFRGSRNFRNRPQNVTEFLFLVERF
Sequences:
>Translated_364_residues MEEDPRFLTEQIVTYLGNKRSLLHFLGTGLEQVKKRLGKERLKAGDLFSGSGIVARFLKQHSEDLIVNDLEEYSRVVNTC YLSNAEEVENLELDRHYRRLLRYMETHESPGFITELYAPRNPDCITADDRVFYTRRNAVYLDTARQTINLLPAEVRPYFI APLLAEASVHTNTSGVFKGFYKDRNGIGKFGGTGGNALSRILGEISLPFPVFSRFDCRYSIHCRDANELAAELPEMDVVY LDPPYNQHPYGSNYFMLNLLSSYEKPEETSRVSGIPADWKRSTYNSRQHAPEALFRLLEDCPAKFILLSYSSEGFINYEE MTGFLGRLGHTVTLETPYAAFRGSRNFRNRPQNVTEFLFLVERF >Mature_364_residues MEEDPRFLTEQIVTYLGNKRSLLHFLGTGLEQVKKRLGKERLKAGDLFSGSGIVARFLKQHSEDLIVNDLEEYSRVVNTC YLSNAEEVENLELDRHYRRLLRYMETHESPGFITELYAPRNPDCITADDRVFYTRRNAVYLDTARQTINLLPAEVRPYFI APLLAEASVHTNTSGVFKGFYKDRNGIGKFGGTGGNALSRILGEISLPFPVFSRFDCRYSIHCRDANELAAELPEMDVVY LDPPYNQHPYGSNYFMLNLLSSYEKPEETSRVSGIPADWKRSTYNSRQHAPEALFRLLEDCPAKFILLSYSSEGFINYEE MTGFLGRLGHTVTLETPYAAFRGSRNFRNRPQNVTEFLFLVERF
Specific function: This methylase recognizes the double-stranded sequence CATG, causes specific methylation on A-2 on both strands and protects the DNA from cleavage by the NlaIII endonuclease [H]
COG id: COG3392
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 41831; Mature: 41831
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEDPRFLTEQIVTYLGNKRSLLHFLGTGLEQVKKRLGKERLKAGDLFSGSGIVARFLKQ CCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH HSEDLIVNDLEEYSRVVNTCYLSNAEEVENLELDRHYRRLLRYMETHESPGFITELYAPR CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC NPDCITADDRVFYTRRNAVYLDTARQTINLLPAEVRPYFIAPLLAEASVHTNTSGVFKGF CCCEECCCCEEEEEECCEEEEECHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHH YKDRNGIGKFGGTGGNALSRILGEISLPFPVFSRFDCRYSIHCRDANELAAELPEMDVVY HHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCHHHHHHHCCCCCEEE LDPPYNQHPYGSNYFMLNLLSSYEKPEETSRVSGIPADWKRSTYNSRQHAPEALFRLLED ECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHH CPAKFILLSYSSEGFINYEEMTGFLGRLGHTVTLETPYAAFRGSRNFRNRPQNVTEFLFL CCCEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHH VERF HHCC >Mature Secondary Structure MEEDPRFLTEQIVTYLGNKRSLLHFLGTGLEQVKKRLGKERLKAGDLFSGSGIVARFLKQ CCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH HSEDLIVNDLEEYSRVVNTCYLSNAEEVENLELDRHYRRLLRYMETHESPGFITELYAPR CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC NPDCITADDRVFYTRRNAVYLDTARQTINLLPAEVRPYFIAPLLAEASVHTNTSGVFKGF CCCEECCCCEEEEEECCEEEEECHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHH YKDRNGIGKFGGTGGNALSRILGEISLPFPVFSRFDCRYSIHCRDANELAAELPEMDVVY HHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCHHHHHHHCCCCCEEE LDPPYNQHPYGSNYFMLNLLSSYEKPEETSRVSGIPADWKRSTYNSRQHAPEALFRLLED ECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHH CPAKFILLSYSSEGFINYEEMTGFLGRLGHTVTLETPYAAFRGSRNFRNRPQNVTEFLFL CCCEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHH VERF HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2277628 [H]