Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is cysJ [H]
Identifier: 187736382
GI number: 187736382
Start: 2306040
End: 2306474
Strand: Reverse
Name: cysJ [H]
Synonym: Amuc_1899
Alternate gene names: 187736382
Gene position: 2306474-2306040 (Counterclockwise)
Preceding gene: 187736383
Following gene: 187736377
Centisome position: 86.58
GC content: 51.95
Gene sequence:
>435_bases ATGGAAATCACTATTATCTACGGAACGGAAACTGGCAATTCGGAGAGTCTGGCCCAGGACGCACGGGCAAAATTGACCAA GCTCGGCCATCAGGCAAAGGTGGTTGACATGGAAGGTATAACGGTGGAACAGTTGAAGAATGCGGGAACGCTGCTGGTCA TCACCAGTACGTGGGGGGACGGAGAACCTCCCACCAACGCAGAGGCCCTCCATCAGGAATTGAAGGACTCTTCGGAAGAT TTGTCCGAGGTAAGCTACGCCGTTTTTGCCCTTGGAGATGAATTTTACGAAAACTTCTGCCAGGCTGGCAAGGACTTCGA TTCCTTCCTGGAACGTTTGAAAGCGCAAAGGCTTCTGCCGGTAGTGCTTTCCAATGGAGACCATGATGATACCTTCCCGG AATGGGTGGATGCCATCGCGGAAAAACTCTCCTGA
Upstream 100 bases:
>100_bases ATAAACAAGGAAGAAAAATTCAGCCGTCGTCCTGCTGTTTTGCCTTGCCTGTTTAATTAGTTTAATCTAACTTTCGTTGT CAAACCAATCATCAGAACGC
Downstream 100 bases:
>100_bases TGTTTTTTCAAGGTTTGCAATACCTTATCCTCAAAAGAGCGCTTCTTCCGGGATGAACGTCTGGAGGAAGCGCTTTTTCC TGAAAAAAGCAGGAACTCTC
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEITIIYGTETGNSESLAQDARAKLTKLGHQAKVVDMEGITVEQLKNAGTLLVITSTWGDGEPPTNAEALHQELKDSSED LSEVSYAVFALGDEFYENFCQAGKDFDSFLERLKAQRLLPVVLSNGDHDDTFPEWVDAIAEKLS
Sequences:
>Translated_144_residues MEITIIYGTETGNSESLAQDARAKLTKLGHQAKVVDMEGITVEQLKNAGTLLVITSTWGDGEPPTNAEALHQELKDSSED LSEVSYAVFALGDEFYENFCQAGKDFDSFLERLKAQRLLPVVLSNGDHDDTFPEWVDAIAEKLS >Mature_144_residues MEITIIYGTETGNSESLAQDARAKLTKLGHQAKVVDMEGITVEQLKNAGTLLVITSTWGDGEPPTNAEALHQELKDSSED LSEVSYAVFALGDEFYENFCQAGKDFDSFLERLKAQRLLPVVLSNGDHDDTFPEWVDAIAEKLS
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI24041029, Length=139, Percent_Identity=38.1294964028777, Blast_Score=84, Evalue=5e-17, Organism=Homo sapiens, GI127139033, Length=141, Percent_Identity=31.2056737588652, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789123, Length=145, Percent_Identity=39.3103448275862, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1789154, Length=117, Percent_Identity=41.025641025641, Blast_Score=80, Evalue=6e-17, Organism=Escherichia coli, GI1790181, Length=139, Percent_Identity=30.2158273381295, Blast_Score=60, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17554134, Length=150, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17566446, Length=158, Percent_Identity=31.6455696202532, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322597, Length=153, Percent_Identity=31.3725490196078, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI17137192, Length=144, Percent_Identity=30.5555555555556, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 15838; Mature: 15838
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITIIYGTETGNSESLAQDARAKLTKLGHQAKVVDMEGITVEQLKNAGTLLVITSTWGD CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCEEEEEECCCC GEPPTNAEALHQELKDSSEDLSEVSYAVFALGDEFYENFCQAGKDFDSFLERLKAQRLLP CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VVLSNGDHDDTFPEWVDAIAEKLS HHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MEITIIYGTETGNSESLAQDARAKLTKLGHQAKVVDMEGITVEQLKNAGTLLVITSTWGD CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCEEEEEECCCC GEPPTNAEALHQELKDSSEDLSEVSYAVFALGDEFYENFCQAGKDFDSFLERLKAQRLLP CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VVLSNGDHDDTFPEWVDAIAEKLS HHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]