Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736365

Identifier: 187736365

GI number: 187736365

Start: 2287383

End: 2287670

Strand: Reverse

Name: 187736365

Synonym: Amuc_1882

Alternate gene names: NA

Gene position: 2287670-2287383 (Counterclockwise)

Preceding gene: 187736368

Following gene: 187736364

Centisome position: 85.87

GC content: 55.56

Gene sequence:

>288_bases
ATGAAAAACAAGATTCCCATTCCGCCCAACGGCTCCAGGCAGCAGCTTCTGGTCAGGGCCATCAATTACTTCCGCAGCCG
GGAAGGAGAACCGCGCCTGTTCACCAGACGCAAGCTTGTCCTCCTGGCTCTGACGGCTCTTTATGCCTTTTCCCCCATTG
ACCTGATTCCGGATTTCATTCCGGGAGTAGGACAGATAGATGACCTGACCGTCATTGCCTTCACCTTCCTGGCCCTGTTC
ATGCCCCCCATCAGGGAACATGGTTCCCATGAAGACCCGGAACCCTGA

Upstream 100 bases:

>100_bases
GCAGGACGAAGGGGGCCGTTATCCCGCCTCCGGGTCTGCTTCCGGTCCATATAAAAAAGAGTTTCTTTTCCATTGACGGT
AAATTCACCCCTGCATCTCC

Downstream 100 bases:

>100_bases
ATTTCCGCCACGCACAACATCTCATGAGCGGATCCTCCCCCACCTTTTTCCATTCCCCCGCCGTTGTCGCGCTGGCCAGG
GGTGCCGTTCTGATAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF
MPPIREHGSHEDPEP

Sequences:

>Translated_95_residues
MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF
MPPIREHGSHEDPEP
>Mature_95_residues
MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF
MPPIREHGSHEDPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10799; Mature: 10799

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PGVGQIDDLTVIAFTFLALFMPPIREHGSHEDPEP
CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PGVGQIDDLTVIAFTFLALFMPPIREHGSHEDPEP
CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA