Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736365
Identifier: 187736365
GI number: 187736365
Start: 2287383
End: 2287670
Strand: Reverse
Name: 187736365
Synonym: Amuc_1882
Alternate gene names: NA
Gene position: 2287670-2287383 (Counterclockwise)
Preceding gene: 187736368
Following gene: 187736364
Centisome position: 85.87
GC content: 55.56
Gene sequence:
>288_bases ATGAAAAACAAGATTCCCATTCCGCCCAACGGCTCCAGGCAGCAGCTTCTGGTCAGGGCCATCAATTACTTCCGCAGCCG GGAAGGAGAACCGCGCCTGTTCACCAGACGCAAGCTTGTCCTCCTGGCTCTGACGGCTCTTTATGCCTTTTCCCCCATTG ACCTGATTCCGGATTTCATTCCGGGAGTAGGACAGATAGATGACCTGACCGTCATTGCCTTCACCTTCCTGGCCCTGTTC ATGCCCCCCATCAGGGAACATGGTTCCCATGAAGACCCGGAACCCTGA
Upstream 100 bases:
>100_bases GCAGGACGAAGGGGGCCGTTATCCCGCCTCCGGGTCTGCTTCCGGTCCATATAAAAAAGAGTTTCTTTTCCATTGACGGT AAATTCACCCCTGCATCTCC
Downstream 100 bases:
>100_bases ATTTCCGCCACGCACAACATCTCATGAGCGGATCCTCCCCCACCTTTTTCCATTCCCCCGCCGTTGTCGCGCTGGCCAGG GGTGCCGTTCTGATAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF MPPIREHGSHEDPEP
Sequences:
>Translated_95_residues MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF MPPIREHGSHEDPEP >Mature_95_residues MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFIPGVGQIDDLTVIAFTFLALF MPPIREHGSHEDPEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10799; Mature: 10799
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC PGVGQIDDLTVIAFTFLALFMPPIREHGSHEDPEP CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MKNKIPIPPNGSRQQLLVRAINYFRSREGEPRLFTRRKLVLLALTALYAFSPIDLIPDFI CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHC PGVGQIDDLTVIAFTFLALFMPPIREHGSHEDPEP CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA