Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yigM [H]

Identifier: 187736332

GI number: 187736332

Start: 2248025

End: 2248933

Strand: Reverse

Name: yigM [H]

Synonym: Amuc_1849

Alternate gene names: 187736332

Gene position: 2248933-2248025 (Counterclockwise)

Preceding gene: 187736334

Following gene: 187736331

Centisome position: 84.42

GC content: 55.34

Gene sequence:

>909_bases
ATGCTCTGCGCCGTGGGCATTGACTTGGTTTTCCTCTCTCCGTATGCTTCCGCCCGCATGCCTGCGTTGCTGCTCACGTC
TTTCATTTGGGCGTTGTCATTCGGACTGCTGGGAAATTGCCTGTCCGGACTTCCCGCCAGCTTTGTCGCACTGGCACGCA
TGGCCGGTTCATTTGCCGTTTTTCTCCCCTTCGTCCGGAAGGCGCCCCTCAGCCATGCCGTGGGGATGATGGGGATAGGC
GCCGTCCAGTTCGGAGGGATGTATCTTTTCTATATCGCTGCCTTCCACTATCTGCCTTCCCACCAGGTTGCCCTTTTTAC
AGCCACCACGCCGATTTATGTGGTTCTAATAGACGGCCTGATGAAAAAGAATCTTCCGCCGCTCCATCTGGCGGCGGCTA
TTCTTGCAGCCATGGGAGGGGCGGGAATCCTTTGGAAAGGATATTCCTCCGGTAACGGGGAGTTAACAGGAATCGTTCTG
GTCCAGCTTTCCAACCTCTGCTTCGCGGCAGGTCAGATAGCCTACATTTCCCTGAAAAATTCCTGGTTCGGGAGAAGCGA
AGCATCCTGCTTCGCCTATGCCTATGCAGGCGCCCTGCTGGTTACTCTGCCTTCCGGCCTGCCGTCAGGACTGGCCTGCT
GGCAGGGGATTTCAACCGTGCAATGGTGGCTGCTGACCTATTTGGGCGTCATCGCTTCAGGAGTCTGTTTTTTCCTGTGG
AATTACGGCGCGCGCCGGGTAACTCCCGTAAAGCTGGCGATTATGAACAATCTCAAGATTCCCCTGGCGGCCATGACTTC
CCTGCTCCTGTTCAGGGAGCATTCCAACATGTTCCTTCTGTCCATCGGCTGCCTGCTTATCCTGGCCTCTTTCCTGATCG
TCCCTATTTCCTTAAAAAACGACGCATAA

Upstream 100 bases:

>100_bases
TTTTCCTGAACACCCCGGAATTCAATATTTCGGGGTGTTTTTATGTTTAGAACCATTATCTTACCCCGTTTTTTGGGTAA
TTTTGCATGTTCCCGACTAT

Downstream 100 bases:

>100_bases
AATAAATTCCAGACGCCCTATTCCGTCCGAATTGGAGGCCCCGCCATTTAGCAGATTTGGCCAAGGGTGGGCATGACACA
TCACATCCGTTTCATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLCAVGIDLVFLSPYASARMPALLLTSFIWALSFGLLGNCLSGLPASFVALARMAGSFAVFLPFVRKAPLSHAVGMMGIG
AVQFGGMYLFYIAAFHYLPSHQVALFTATTPIYVVLIDGLMKKNLPPLHLAAAILAAMGGAGILWKGYSSGNGELTGIVL
VQLSNLCFAAGQIAYISLKNSWFGRSEASCFAYAYAGALLVTLPSGLPSGLACWQGISTVQWWLLTYLGVIASGVCFFLW
NYGARRVTPVKLAIMNNLKIPLAAMTSLLLFREHSNMFLLSIGCLLILASFLIVPISLKNDA

Sequences:

>Translated_302_residues
MLCAVGIDLVFLSPYASARMPALLLTSFIWALSFGLLGNCLSGLPASFVALARMAGSFAVFLPFVRKAPLSHAVGMMGIG
AVQFGGMYLFYIAAFHYLPSHQVALFTATTPIYVVLIDGLMKKNLPPLHLAAAILAAMGGAGILWKGYSSGNGELTGIVL
VQLSNLCFAAGQIAYISLKNSWFGRSEASCFAYAYAGALLVTLPSGLPSGLACWQGISTVQWWLLTYLGVIASGVCFFLW
NYGARRVTPVKLAIMNNLKIPLAAMTSLLLFREHSNMFLLSIGCLLILASFLIVPISLKNDA
>Mature_302_residues
MLCAVGIDLVFLSPYASARMPALLLTSFIWALSFGLLGNCLSGLPASFVALARMAGSFAVFLPFVRKAPLSHAVGMMGIG
AVQFGGMYLFYIAAFHYLPSHQVALFTATTPIYVVLIDGLMKKNLPPLHLAAAILAAMGGAGILWKGYSSGNGELTGIVL
VQLSNLCFAAGQIAYISLKNSWFGRSEASCFAYAYAGALLVTLPSGLPSGLACWQGISTVQWWLLTYLGVIASGVCFFLW
NYGARRVTPVKLAIMNNLKIPLAAMTSLLLFREHSNMFLLSIGCLLILASFLIVPISLKNDA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=278, Percent_Identity=36.6906474820144, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32247; Mature: 32247

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCAVGIDLVFLSPYASARMPALLLTSFIWALSFGLLGNCLSGLPASFVALARMAGSFAV
CEEEEEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
FLPFVRKAPLSHAVGMMGIGAVQFGGMYLFYIAAFHYLPSHQVALFTATTPIYVVLIDGL
HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHEEHHH
MKKNLPPLHLAAAILAAMGGAGILWKGYSSGNGELTGIVLVQLSNLCFAAGQIAYISLKN
HHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEHHHHHHHCCCEEEEEEEC
SWFGRSEASCFAYAYAGALLVTLPSGLPSGLACWQGISTVQWWLLTYLGVIASGVCFFLW
CCCCCCCCHHHHHHHHCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NYGARRVTPVKLAIMNNLKIPLAAMTSLLLFREHSNMFLLSIGCLLILASFLIVPISLKN
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHEEEEECC
DA
CC
>Mature Secondary Structure
MLCAVGIDLVFLSPYASARMPALLLTSFIWALSFGLLGNCLSGLPASFVALARMAGSFAV
CEEEEEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH
FLPFVRKAPLSHAVGMMGIGAVQFGGMYLFYIAAFHYLPSHQVALFTATTPIYVVLIDGL
HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHEEHHH
MKKNLPPLHLAAAILAAMGGAGILWKGYSSGNGELTGIVLVQLSNLCFAAGQIAYISLKN
HHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEHHHHHHHCCCEEEEEEEC
SWFGRSEASCFAYAYAGALLVTLPSGLPSGLACWQGISTVQWWLLTYLGVIASGVCFFLW
CCCCCCCCHHHHHHHHCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NYGARRVTPVKLAIMNNLKIPLAAMTSLLLFREHSNMFLLSIGCLLILASFLIVPISLKN
HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHEEEEECC
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]