Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fucA [H]
Identifier: 187736316
GI number: 187736316
Start: 2222637
End: 2223452
Strand: Reverse
Name: fucA [H]
Synonym: Amuc_1829
Alternate gene names: 187736316
Gene position: 2223452-2222637 (Counterclockwise)
Preceding gene: 187736317
Following gene: 187736314
Centisome position: 83.46
GC content: 58.7
Gene sequence:
>816_bases ATGTCAGAAGACTGGTCAATCTCCCCTCCCCTGCCGGACAAAGTGTTCCCATGGGAAAAATACAACCCCGTCACGCGGGA GGAAGTGAATGAATTCTTCCATTCCCCGGAAATTCTGGTCATCAAGGAACGCATGTGCGACATAGGGCGCCGCCTGTGGA ACCGGGAATATGTGGACGGCAACGGGGGCAACATCTCCGTGCGCGTGGCTCAGAACCTGCTGCTCTGCTCCCCCACCCTG TGTTCCAAAGGCTTCATGGCTGTGGAAGACATCTGCATGGTGGACATGGACGCGCGCCAGAAAGCGGGCATCCGCCCCTC CACCAGCGAGGTGAAAACGCACATTGCCATGATGAAATCCGTGGGCGTCAATGCCTGCATCCATGCCCATCCCCCGCACT GCAATGCTTTCCTGTTTGCCGGGCAGGTTCCCCCCTCCGGCATCAATCCGGAAGCGGATATCTTCCTGGGACACATCCCG CTGGCCCCTTACGGAACGCCCGGCTCTCTGGAAACGGCCCGGGCCGTGGCGGAAGCAGCCAGACAATCCACCGTCGTTTT CATGGAAAACCACGGAGTCATTACCGGAGCACGTGACGTGGAAGAAGCGGAATGGTTCATGGAAAATGCGGATGCCTACT GCCGCATGGTGCTGATGGCCGGCCTGCACAAAGCACCTCTGAACCAGGTGGGGCCGGAAGGCGTGGCGGACTTCCTCGCC ATTCGCAAATCCATCGGTTACGCCGTGCCGGACAACCAGCCCCTGTACAACACGGAAACCTACGCCGGGTACAAACTGGG AAAATCCGGTAAATAA
Upstream 100 bases:
>100_bases GAGCAGGCCCGGGCCGCCTTCGGCATCGCCTACCGGACATATATGCCGGGTTCCCAGGAAGCCGCCTACGAAAAGTTCAA CCAATAACACGCTACTAAAT
Downstream 100 bases:
>100_bases CTCCCTTTTTCAACGGGGTGGCTGGAGCAGTTCAGCCGCCCCGTTTTTAACGGACCCACTCCGGAATAAAAACTTCCTTC TTTTACGCCAACACCTCCTG
Product: class II aldolase/adducin family protein
Products: NA
Alternate protein names: L-fuculose-1-phosphate aldolase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSEDWSISPPLPDKVFPWEKYNPVTREEVNEFFHSPEILVIKERMCDIGRRLWNREYVDGNGGNISVRVAQNLLLCSPTL CSKGFMAVEDICMVDMDARQKAGIRPSTSEVKTHIAMMKSVGVNACIHAHPPHCNAFLFAGQVPPSGINPEADIFLGHIP LAPYGTPGSLETARAVAEAARQSTVVFMENHGVITGARDVEEAEWFMENADAYCRMVLMAGLHKAPLNQVGPEGVADFLA IRKSIGYAVPDNQPLYNTETYAGYKLGKSGK
Sequences:
>Translated_271_residues MSEDWSISPPLPDKVFPWEKYNPVTREEVNEFFHSPEILVIKERMCDIGRRLWNREYVDGNGGNISVRVAQNLLLCSPTL CSKGFMAVEDICMVDMDARQKAGIRPSTSEVKTHIAMMKSVGVNACIHAHPPHCNAFLFAGQVPPSGINPEADIFLGHIP LAPYGTPGSLETARAVAEAARQSTVVFMENHGVITGARDVEEAEWFMENADAYCRMVLMAGLHKAPLNQVGPEGVADFLA IRKSIGYAVPDNQPLYNTETYAGYKLGKSGK >Mature_270_residues SEDWSISPPLPDKVFPWEKYNPVTREEVNEFFHSPEILVIKERMCDIGRRLWNREYVDGNGGNISVRVAQNLLLCSPTLC SKGFMAVEDICMVDMDARQKAGIRPSTSEVKTHIAMMKSVGVNACIHAHPPHCNAFLFAGQVPPSGINPEADIFLGHIPL APYGTPGSLETARAVAEAARQSTVVFMENHGVITGARDVEEAEWFMENADAYCRMVLMAGLHKAPLNQVGPEGVADFLAI RKSIGYAVPDNQPLYNTETYAGYKLGKSGK
Specific function: Catalyzes the reversible aldol cleavage of L-fuculose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde [H]
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789094, Length=186, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789164, Length=194, Percent_Identity=27.319587628866, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: =4.1.2.17 [H]
Molecular weight: Translated: 29808; Mature: 29677
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDWSISPPLPDKVFPWEKYNPVTREEVNEFFHSPEILVIKERMCDIGRRLWNREYVDG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEECC NGGNISVRVAQNLLLCSPTLCSKGFMAVEDICMVDMDARQKAGIRPSTSEVKTHIAMMKS CCCEEEEEEECCHHHCCCHHHHCCCHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHH VGVNACIHAHPPHCNAFLFAGQVPPSGINPEADIFLGHIPLAPYGTPGSLETARAVAEAA CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH RQSTVVFMENHGVITGARDVEEAEWFMENADAYCRMVLMAGLHKAPLNQVGPEGVADFLA HCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHH IRKSIGYAVPDNQPLYNTETYAGYKLGKSGK HHHHCCCCCCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure SEDWSISPPLPDKVFPWEKYNPVTREEVNEFFHSPEILVIKERMCDIGRRLWNREYVDG CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEECC NGGNISVRVAQNLLLCSPTLCSKGFMAVEDICMVDMDARQKAGIRPSTSEVKTHIAMMKS CCCEEEEEEECCHHHCCCHHHHCCCHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHH VGVNACIHAHPPHCNAFLFAGQVPPSGINPEADIFLGHIPLAPYGTPGSLETARAVAEAA CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH RQSTVVFMENHGVITGARDVEEAEWFMENADAYCRMVLMAGLHKAPLNQVGPEGVADFLA HCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHH IRKSIGYAVPDNQPLYNTETYAGYKLGKSGK HHHHCCCCCCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA