Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736283
Identifier: 187736283
GI number: 187736283
Start: 2183790
End: 2183972
Strand: Direct
Name: 187736283
Synonym: Amuc_1796
Alternate gene names: NA
Gene position: 2183790-2183972 (Clockwise)
Preceding gene: 187736282
Following gene: 187736284
Centisome position: 81.97
GC content: 57.38
Gene sequence:
>183_bases ATGATGCGACCCGGGTCCGGGGCGCCCATCATTCCGGGCGTTATGGCGCTGGTCGGGAGACTGGCGGCGGAAGATGCCGC CAGGAACGGCGGCCTTCCGCTTCTGGATTCATTCCGGGTAAAAGATGCGCCTTTTGCGGAGAAAGTGAAAAATGAAGAGG CTTTTTCCGATTTTGCATGTTGA
Upstream 100 bases:
>100_bases GCCGGGACCGGCTGTTGAAGGAGTTTCCTGAGGCGCAGGCGGGCACAGGCCTGTATGGAAATCCCCTGTGGTGTCTGTCG TGCCGGGATGCGAGGCGGGG
Downstream 100 bases:
>100_bases GAAATAATTTTATGACAGTTGATATGTATTCATTATAAATGAATTAAAAATAATGAAGCAGAAAGTGCTAAAAATCTTTT GCATTATAGTTACTATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MMRPGSGAPIIPGVMALVGRLAAEDAARNGGLPLLDSFRVKDAPFAEKVKNEEAFSDFAC
Sequences:
>Translated_60_residues MMRPGSGAPIIPGVMALVGRLAAEDAARNGGLPLLDSFRVKDAPFAEKVKNEEAFSDFAC >Mature_60_residues MMRPGSGAPIIPGVMALVGRLAAEDAARNGGLPLLDSFRVKDAPFAEKVKNEEAFSDFAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6306; Mature: 6306
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPGSGAPIIPGVMALVGRLAAEDAARNGGLPLLDSFRVKDAPFAEKVKNEEAFSDFAC CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCC >Mature Secondary Structure MMRPGSGAPIIPGVMALVGRLAAEDAARNGGLPLLDSFRVKDAPFAEKVKNEEAFSDFAC CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA