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The map label for this gene is degS [C]

Identifier: 187736277

GI number: 187736277

Start: 2178009

End: 2179028

Strand: Reverse

Name: degS [C]

Synonym: Amuc_1790

Alternate gene names: 187736277

Gene position: 2179028-2178009 (Counterclockwise)

Preceding gene: 187736278

Following gene: 187736272

Centisome position: 81.79

GC content: 56.47

Gene sequence:

>1020_bases
ATGAAATTTCCTTTCTGCGTCTGCCTGTCTCCCCTGGTTTTCGCCCTGTTCCACCCCGCTCTGGCGGAAGGAAATAACGG
AAGCCTGGATTTTGAACAGAGAATCAACGGGAAAGCCATTCTGAAAACTATCGAGCCCATCCGCGAACGTCTTCAGGACT
TGAGCGCAGTTTTCTTTTCCGGTCACGATGTTGTGATTTACGGCATTGTGCTGAGCCCGGACGGCTACATCGCCACCAAA
GCCTCGGAACTCCATTCTTACAGGGATCTGACCATCCGGGTAGGTTCTTCCAAATATGGGCAGTTCAGGGAAATTGGCTC
GGACCCGTCCACAGACATCGCAGTAGTGAAAGTGGAAGCCGCCGGGCTGCACGCTCCCGGCCCTGTCAGCAATGATGCCG
CCATGGGAACCCTGGTAGTCAGCAACGGCTCCACTACCCGTACGTCCAGACGGCCCCAGCTGGGAACCCTTAGTGCAGAG
CAGCGCCCCATTCCGAACGGAGACACCGCCTACCTGGGCGTCGTTTTCGGCACCCCCTGTACCATTCAGGAAGTTACCAA
GGACGGCCCCGCCGCCCAGGCCGGAGCCCAGGCCGGAGATGAGATTCTGGCGGTGGACGGCACGCCCGTTACTGCTCTGG
ATGCCGTTTCCCCCATTCTGTCCAGGAAAAAAGTTGGAGAAAGAGTGACACTGAAAGTCAAACGCAAGGATAAAAGGTTA
TCCTACACCATCACGCTGGGTTCCAGACGCCAGGCCCTGGGAGGAAACGCTCCTGAGGATTCCAATGACCTGATCAGCGG
TGGGTTCAGCAAACGCAGGGATGATTTCCCTATGGTCCTCCAGCATGACACCCCTTCCCGGTACACGCTGATGGGTGGCC
CGCTGCTTAATCTCAAGGGGGAACTCATCGGCATGAACATCGCCAGAGTGAACCGGGCGGAAAATTACGCCCTGCCCATC
AGCGTTGTGCAGAAAAGCGTGCAAAACATCTTGAAAAACACTCCCCAGCCGGGAAAATAG

Upstream 100 bases:

>100_bases
TGAAAGATTTCGACGCTCTGACGGAGGAGACAGCGGAAGGAAAGACCTCCCTGACGCCGCCACCGGAACAGGACAGCCAG
CCATTCTCCACTCAGCCATC

Downstream 100 bases:

>100_bases
CTCAGGAAAATACCGGAATATCTTATTTTCCCGGTACGGAAGAAGCAGTACGTTTTCCTTTCCTTTTCCCCTGCGTGACA
TCCGGCGAAACAGGATGGAT

Product: PDZ/DHR/GLGF domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKFPFCVCLSPLVFALFHPALAEGNNGSLDFEQRINGKAILKTIEPIRERLQDLSAVFFSGHDVVIYGIVLSPDGYIATK
ASELHSYRDLTIRVGSSKYGQFREIGSDPSTDIAVVKVEAAGLHAPGPVSNDAAMGTLVVSNGSTTRTSRRPQLGTLSAE
QRPIPNGDTAYLGVVFGTPCTIQEVTKDGPAAQAGAQAGDEILAVDGTPVTALDAVSPILSRKKVGERVTLKVKRKDKRL
SYTITLGSRRQALGGNAPEDSNDLISGGFSKRRDDFPMVLQHDTPSRYTLMGGPLLNLKGELIGMNIARVNRAENYALPI
SVVQKSVQNILKNTPQPGK

Sequences:

>Translated_339_residues
MKFPFCVCLSPLVFALFHPALAEGNNGSLDFEQRINGKAILKTIEPIRERLQDLSAVFFSGHDVVIYGIVLSPDGYIATK
ASELHSYRDLTIRVGSSKYGQFREIGSDPSTDIAVVKVEAAGLHAPGPVSNDAAMGTLVVSNGSTTRTSRRPQLGTLSAE
QRPIPNGDTAYLGVVFGTPCTIQEVTKDGPAAQAGAQAGDEILAVDGTPVTALDAVSPILSRKKVGERVTLKVKRKDKRL
SYTITLGSRRQALGGNAPEDSNDLISGGFSKRRDDFPMVLQHDTPSRYTLMGGPLLNLKGELIGMNIARVNRAENYALPI
SVVQKSVQNILKNTPQPGK
>Mature_339_residues
MKFPFCVCLSPLVFALFHPALAEGNNGSLDFEQRINGKAILKTIEPIRERLQDLSAVFFSGHDVVIYGIVLSPDGYIATK
ASELHSYRDLTIRVGSSKYGQFREIGSDPSTDIAVVKVEAAGLHAPGPVSNDAAMGTLVVSNGSTTRTSRRPQLGTLSAE
QRPIPNGDTAYLGVVFGTPCTIQEVTKDGPAAQAGAQAGDEILAVDGTPVTALDAVSPILSRKKVGERVTLKVKRKDKRL
SYTITLGSRRQALGGNAPEDSNDLISGGFSKRRDDFPMVLQHDTPSRYTLMGGPLLNLKGELIGMNIARVNRAENYALPI
SVVQKSVQNILKNTPQPGK

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 36339; Mature: 36339

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPFCVCLSPLVFALFHPALAEGNNGSLDFEQRINGKAILKTIEPIRERLQDLSAVFFS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GHDVVIYGIVLSPDGYIATKASELHSYRDLTIRVGSSKYGQFREIGSDPSTDIAVVKVEA
CCEEEEEEEEECCCCCEEECHHHHHCCEEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEE
AGLHAPGPVSNDAAMGTLVVSNGSTTRTSRRPQLGTLSAEQRPIPNGDTAYLGVVFGTPC
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
TIQEVTKDGPAAQAGAQAGDEILAVDGTPVTALDAVSPILSRKKVGERVTLKVKRKDKRL
CHHHHHCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEE
SYTITLGSRRQALGGNAPEDSNDLISGGFSKRRDDFPMVLQHDTPSRYTLMGGPLLNLKG
EEEEEECCCCHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEECCCC
ELIGMNIARVNRAENYALPISVVQKSVQNILKNTPQPGK
EEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKFPFCVCLSPLVFALFHPALAEGNNGSLDFEQRINGKAILKTIEPIRERLQDLSAVFFS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GHDVVIYGIVLSPDGYIATKASELHSYRDLTIRVGSSKYGQFREIGSDPSTDIAVVKVEA
CCEEEEEEEEECCCCCEEECHHHHHCCEEEEEEECCCCCCHHHHCCCCCCCCEEEEEEEE
AGLHAPGPVSNDAAMGTLVVSNGSTTRTSRRPQLGTLSAEQRPIPNGDTAYLGVVFGTPC
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
TIQEVTKDGPAAQAGAQAGDEILAVDGTPVTALDAVSPILSRKKVGERVTLKVKRKDKRL
CHHHHHCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEE
SYTITLGSRRQALGGNAPEDSNDLISGGFSKRRDDFPMVLQHDTPSRYTLMGGPLLNLKG
EEEEEECCCCHHCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCEEEECCCEECCCC
ELIGMNIARVNRAENYALPISVVQKSVQNILKNTPQPGK
EEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA