Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736231
Identifier: 187736231
GI number: 187736231
Start: 2124949
End: 2125545
Strand: Direct
Name: 187736231
Synonym: Amuc_1744
Alternate gene names: NA
Gene position: 2124949-2125545 (Clockwise)
Preceding gene: 187736230
Following gene: 187736233
Centisome position: 79.76
GC content: 56.62
Gene sequence:
>597_bases ATGTTGAAAATGATTTTTCTGCTGGCCCGGCGCATGTTTATACGGCTGCTGCTGGTGCTGCTTCCGCTGGGCCTGTTTAT GTTCCTGGCGCAGGCCATTCCCCTTTCCCCTCTGCAATCCCTGCTGGTGCTGGTTCCGGTGATTGCCTTTGAAGTGTGGC TCGTCATCAGGCATCTGCTGCCCGTCATGGGGGAGCTGGTGACCAAGACGCTGTATTCCTCCAATATTACTACGGATGAG GAAGTGCTGGTGGAGGCTTCCAGGCGCATGCTGAATTCCGGGGATCCCCAGGGCGCTCTGGAATTGCTGGAACGCTACCG GAAGGAGAATCCGGGGCTGGTGCGTTCCTGGCTCATGGAATCCAGCCTGCTGAACGATATGCGCCGGTACGCGGATTCCG TCAACGTCCTTCAGAAAGGACTGGAATACGGAGGGTGGCGCAAGGAGGACCGGGCTCTGTTCCTGTACAAGATAGGAGCC ATTTACGAGTCCCAGCTCAATAACCCGGACAGGGCCCGGAAGTATTGGGAGGAAGCTGCGGATAAATATCCCGATACGGC CTATGGCCGCTCCGCACGGGACAAGGTTATGTTTTAA
Upstream 100 bases:
>100_bases AGCGGCTGCTCCGCGGCCCTTTCACCGGGAAGGGCCGCGGAAGCGTTCCCCCTTTCCGGGGGCGCATGCCCCCTCCCCGG CTTCTCTTGAATCCCCTGCC
Downstream 100 bases:
>100_bases TGCGGCTTTCCGTGAAGGGATGGCCATCCGGAATTTTTTCATTGCTTTAAAGAACCGCGCGTGACGGAGGAATAAGTCTT TTTCCTTATTTTGCGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLKMIFLLARRMFIRLLLVLLPLGLFMFLAQAIPLSPLQSLLVLVPVIAFEVWLVIRHLLPVMGELVTKTLYSSNITTDE EVLVEASRRMLNSGDPQGALELLERYRKENPGLVRSWLMESSLLNDMRRYADSVNVLQKGLEYGGWRKEDRALFLYKIGA IYESQLNNPDRARKYWEEAADKYPDTAYGRSARDKVMF
Sequences:
>Translated_198_residues MLKMIFLLARRMFIRLLLVLLPLGLFMFLAQAIPLSPLQSLLVLVPVIAFEVWLVIRHLLPVMGELVTKTLYSSNITTDE EVLVEASRRMLNSGDPQGALELLERYRKENPGLVRSWLMESSLLNDMRRYADSVNVLQKGLEYGGWRKEDRALFLYKIGA IYESQLNNPDRARKYWEEAADKYPDTAYGRSARDKVMF >Mature_198_residues MLKMIFLLARRMFIRLLLVLLPLGLFMFLAQAIPLSPLQSLLVLVPVIAFEVWLVIRHLLPVMGELVTKTLYSSNITTDE EVLVEASRRMLNSGDPQGALELLERYRKENPGLVRSWLMESSLLNDMRRYADSVNVLQKGLEYGGWRKEDRALFLYKIGA IYESQLNNPDRARKYWEEAADKYPDTAYGRSARDKVMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22915; Mature: 22915
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMIFLLARRMFIRLLLVLLPLGLFMFLAQAIPLSPLQSLLVLVPVIAFEVWLVIRHLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PVMGELVTKTLYSSNITTDEEVLVEASRRMLNSGDPQGALELLERYRKENPGLVRSWLME HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH SSLLNDMRRYADSVNVLQKGLEYGGWRKEDRALFLYKIGAIYESQLNNPDRARKYWEEAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DKYPDTAYGRSARDKVMF HCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKMIFLLARRMFIRLLLVLLPLGLFMFLAQAIPLSPLQSLLVLVPVIAFEVWLVIRHLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PVMGELVTKTLYSSNITTDEEVLVEASRRMLNSGDPQGALELLERYRKENPGLVRSWLME HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH SSLLNDMRRYADSVNVLQKGLEYGGWRKEDRALFLYKIGAIYESQLNNPDRARKYWEEAA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DKYPDTAYGRSARDKVMF HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA