Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736230

Identifier: 187736230

GI number: 187736230

Start: 2124001

End: 2124849

Strand: Direct

Name: 187736230

Synonym: Amuc_1743

Alternate gene names: NA

Gene position: 2124001-2124849 (Clockwise)

Preceding gene: 187736225

Following gene: 187736231

Centisome position: 79.73

GC content: 59.84

Gene sequence:

>849_bases
ATGAAAGCAACAGCCCTGTTCCTGGCGGCTTCCGCCCTGGCCGCGGTTTCCGCCGTCGCCTATGACGGATACGGTTATGA
CCCCCGGCCCGCGAGTTCCTATAACAATACCATCAGCGGAGCGGCCCATATCGGCTATGATTCCCGGTATGCCTATAAAG
ACGTGGTGGCTTCCTCCCTGCTGAACCGCAGCGGCGTGTTTAACATCGGCGGCGAGCTGAACCTCAACCTGGCCAGAGAC
TGGAAGCAGGAAATCGGCGCGGAATACATGGCTTTCTGCGACGGGCTGCTGAGCGACAAGGACGCCTTTGACGCCAGCTG
GAAGGCTGTCAAAGAGCTGTTCCCCAATCTTTCCTTCCGGGGCGGGTATGAGTTGAATTACGGCGGCCTCCCGGGGTATT
TGAGCAAGCGCATGGGGAAGGCTCCCCATTCCCTCGCCCAGTCCGTCACGGCGGGGCTGGCGTATGACGATCCGGGCCAC
GGCTATTTTGGCTCCCTGGATGTGCAGTACGGCTTTTACGGCATGACCGGCTGGCGTATTGACCTGAACGCGGGCAAGCG
ATGGAGCGGCCTGATTCATGAAAAGGTGGATTTGGAGCTGAGCGCCGGAACAGGTTATTCCTCCAGTTACTGGGGGCCCG
GCGCAGCCGGGTTTGACCAGGTTAACATCAAACTGGCGGCTCCCGTGCGCGTAACGGGTGTGGACTCCAGCCGCGGGTTC
CGGATTATTCCTTTCATCCAGCTTGACTGGGCGGGAAACACCCGTTCCGAAATCCGCCGCTACGCCGGCATGAACGCGAT
TGAGGACTTCCGCATCCGTGTGGGCGTGGAAGCCGTTTACCGTTTTTAA

Upstream 100 bases:

>100_bases
TTTCATGGTATTTTTCCCGGAGGGTCTCTGTCCATTTCTCCGCGCCGTGCCGGGATTCTTCTTGCGTTGGCGGGCGGGAA
ATGGTTAAGATAAGCTTACT

Downstream 100 bases:

>100_bases
GCGGCTGCTCCGCGGCCCTTTCACCGGGAAGGGCCGCGGAAGCGTTCCCCCTTTCCGGGGGCGCATGCCCCCTCCCCGGC
TTCTCTTGAATCCCCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKATALFLAASALAAVSAVAYDGYGYDPRPASSYNNTISGAAHIGYDSRYAYKDVVASSLLNRSGVFNIGGELNLNLARD
WKQEIGAEYMAFCDGLLSDKDAFDASWKAVKELFPNLSFRGGYELNYGGLPGYLSKRMGKAPHSLAQSVTAGLAYDDPGH
GYFGSLDVQYGFYGMTGWRIDLNAGKRWSGLIHEKVDLELSAGTGYSSSYWGPGAAGFDQVNIKLAAPVRVTGVDSSRGF
RIIPFIQLDWAGNTRSEIRRYAGMNAIEDFRIRVGVEAVYRF

Sequences:

>Translated_282_residues
MKATALFLAASALAAVSAVAYDGYGYDPRPASSYNNTISGAAHIGYDSRYAYKDVVASSLLNRSGVFNIGGELNLNLARD
WKQEIGAEYMAFCDGLLSDKDAFDASWKAVKELFPNLSFRGGYELNYGGLPGYLSKRMGKAPHSLAQSVTAGLAYDDPGH
GYFGSLDVQYGFYGMTGWRIDLNAGKRWSGLIHEKVDLELSAGTGYSSSYWGPGAAGFDQVNIKLAAPVRVTGVDSSRGF
RIIPFIQLDWAGNTRSEIRRYAGMNAIEDFRIRVGVEAVYRF
>Mature_282_residues
MKATALFLAASALAAVSAVAYDGYGYDPRPASSYNNTISGAAHIGYDSRYAYKDVVASSLLNRSGVFNIGGELNLNLARD
WKQEIGAEYMAFCDGLLSDKDAFDASWKAVKELFPNLSFRGGYELNYGGLPGYLSKRMGKAPHSLAQSVTAGLAYDDPGH
GYFGSLDVQYGFYGMTGWRIDLNAGKRWSGLIHEKVDLELSAGTGYSSSYWGPGAAGFDQVNIKLAAPVRVTGVDSSRGF
RIIPFIQLDWAGNTRSEIRRYAGMNAIEDFRIRVGVEAVYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30696; Mature: 30696

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATALFLAASALAAVSAVAYDGYGYDPRPASSYNNTISGAAHIGYDSRYAYKDVVASSL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
LNRSGVFNIGGELNLNLARDWKQEIGAEYMAFCDGLLSDKDAFDASWKAVKELFPNLSFR
HHCCCEEECCCEEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
GGYELNYGGLPGYLSKRMGKAPHSLAQSVTAGLAYDDPGHGYFGSLDVQYGFYGMTGWRI
CCCEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECEEECCEEEE
DLNAGKRWSGLIHEKVDLELSAGTGYSSSYWGPGAAGFDQVNIKLAAPVRVTGVDSSRGF
ECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCE
RIIPFIQLDWAGNTRSEIRRYAGMNAIEDFRIRVGVEAVYRF
EEEEEEEEECCCCCHHHHHHHHCCCCHHHHEEEEEHHHHCCC
>Mature Secondary Structure
MKATALFLAASALAAVSAVAYDGYGYDPRPASSYNNTISGAAHIGYDSRYAYKDVVASSL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
LNRSGVFNIGGELNLNLARDWKQEIGAEYMAFCDGLLSDKDAFDASWKAVKELFPNLSFR
HHCCCEEECCCEEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
GGYELNYGGLPGYLSKRMGKAPHSLAQSVTAGLAYDDPGHGYFGSLDVQYGFYGMTGWRI
CCCEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECEEECCEEEE
DLNAGKRWSGLIHEKVDLELSAGTGYSSSYWGPGAAGFDQVNIKLAAPVRVTGVDSSRGF
ECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCCE
RIIPFIQLDWAGNTRSEIRRYAGMNAIEDFRIRVGVEAVYRF
EEEEEEEEECCCCCHHHHHHHHCCCCHHHHEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA