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The map label for this gene is prfH [C]

Identifier: 187736226

GI number: 187736226

Start: 2120728

End: 2121090

Strand: Reverse

Name: prfH [C]

Synonym: Amuc_1739

Alternate gene names: 187736226

Gene position: 2121090-2120728 (Counterclockwise)

Preceding gene: 187736227

Following gene: 187736224

Centisome position: 79.62

GC content: 59.5

Gene sequence:

>363_bases
ATGGTCAGGCCTGAAAAACTGGCAGCTCTCCGGGAACGGATGGAGGCCCTGGGCATCCGTGAACAGGATCTGGAGGAAAG
CTTTGTCCGCGGAAGCGGGCGAGGCGGCCAGAAAGTAAATAAAACCAACAACTGCGTTTACCTCAGGCACACGCCCACGG
GCATCGCCGTCAAATGCCATGCGGACAGATCCAGGGAACTCAACCGCTTTCTGGCGCGCAGGGAACTGTGCGATGCTGTG
GAACAAATGCAAACGGGCCGATGCGCCGCAAGAACCCGCGTCATCCAGCGCATGAGAAAGCAGAAAGACAGAAGGAGGCG
GAGGCGTTCCGCCCCTGCCCCCTCTCCACCGGACAGCGAATAA

Upstream 100 bases:

>100_bases
TCAACCGTTGCCGTCAGCCTTCGCCCCATGACGGCCGCCAGCCGGGACATGCTGGCCCATGCTGTCCGGCAGCGCGTTAA
CACCTTGCAATCCTCCGGCT

Downstream 100 bases:

>100_bases
CAGAACGGAAATCCGGAATCTCCGCTAGGAACACGGAAAAACCTCACGGTACTTCTCCTTCAACATGGCGAATACATTGT
GGGGAACATAGCGGCTCACC

Product: peptide chain release factor

Products: NA

Alternate protein names: Peptide Chain Release Factor; Peptidyl-TRNA Hydrolase; Peptidyl-TRNA Hydrolase-Like Protein; Peptidyl-TRNA Hydrolase Domain-Containing Protein

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVRPEKLAALRERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELCDAV
EQMQTGRCAARTRVIQRMRKQKDRRRRRRSAPAPSPPDSE

Sequences:

>Translated_120_residues
MVRPEKLAALRERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELCDAV
EQMQTGRCAARTRVIQRMRKQKDRRRRRRSAPAPSPPDSE
>Mature_120_residues
MVRPEKLAALRERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELCDAV
EQMQTGRCAARTRVIQRMRKQKDRRRRRRSAPAPSPPDSE

Specific function: Could Be Involved In Translational Termination. [C]

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI303304971, Length=85, Percent_Identity=47.0588235294118, Blast_Score=84, Evalue=2e-17,
Organism=Homo sapiens, GI219879802, Length=85, Percent_Identity=47.0588235294118, Blast_Score=84, Evalue=2e-17,
Organism=Homo sapiens, GI22748627, Length=85, Percent_Identity=47.0588235294118, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323311, Length=63, Percent_Identity=53.968253968254, Blast_Score=61, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24654113, Length=91, Percent_Identity=48.3516483516484, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13871; Mature: 13871

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRPEKLAALRERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCH
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEC
ADRSRELNRFLARRELCDAVEQMQTGRCAARTRVIQRMRKQKDRRRRRRSAPAPSPPDSE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVRPEKLAALRERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCH
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEC
ADRSRELNRFLARRELCDAVEQMQTGRCAARTRVIQRMRKQKDRRRRRRSAPAPSPPDSE
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA