Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736204

Identifier: 187736204

GI number: 187736204

Start: 2087399

End: 2088991

Strand: Direct

Name: 187736204

Synonym: Amuc_1717

Alternate gene names: NA

Gene position: 2087399-2088991 (Clockwise)

Preceding gene: 187736203

Following gene: 187736208

Centisome position: 78.35

GC content: 55.3

Gene sequence:

>1593_bases
ATGAGTTCCGAGCGCCATTTTTCCAGTAAGCCCTACCGCCCCGCACGCAAGAAAAAGTCTTATTGGAAGCCGGTCCTCTT
TTTGATCCTCCTGGGAGGACTCTGGTTCGGTTATATCCAGTACTGGCCTACGATAGAAGGGTGGTTCAAGCCGACCATCC
ATGAAGTGCACAGCCAGACGCAGGCCATGGGGCATTTGCAGGATATGCTGGCTTCATGGAACGGTTCCGATGCAGAGCTG
GCGCAGATGGCATCCTCCGTGGACAAGCAGGTGGAATGGATGAATTCTCCCGAAGCCAGAGATTCCTTTGCATGGCTTCT
GGCGGTGGAAATGGACCGGCGCGGCATGCTGAAAGAATCCGAACCTATGCTGGCTGCTCTTCTGGAAAAAAAGCTGGCTG
CTTCCTCCTCCATGGCGGCGGAGGACCATACCCGCCTTCTGGGCGTCAGCCTGAACTGGGCGCGGGAATTCGCCCGCCGC
AAGCATGATGCTGTGGCGGAAAAGCTTTATGAAGTGATTTTGAAAAATACGCCGGAAGACCAGGTTTCCATCCGTTTAGC
GTGCTTGGAGCCATTAATCCATTATGCGTACGACCAGGCCAGGTTTGAGCGTTTTTCCGCGTTGTGCAAGCAGGCTGTTT
CTCCTGTCATGAGGAGCATGCTGAATAAGCCGGAGGATGTGAAGAGCATGGTGAAAATCCTGTTGCTTCAGGATACCCTG
CCAGACAAGACCACCGGGTTGCCCGGTGGCACAGGGAGTGCGATTGCACGGGAGCTTCTTACTAAATTCCGCCTGACCGC
CAATCCGGACATGGGCCGCATTATTCTGAATGAATTGAAGATGCCGCTGAACACGCGCCGGAAGTATTCCCAGGAGGAAT
TGAAGACCATGGCCGACCAGCTGGAAGCGGCCCTGATTTGCTTCCGTGCAGCTGAAACGGAGATGGACTGCACGCCGGAG
ACAATGCTTGCCTTGGCACGGGTAAGGATGCAGATGGGGGATTTGAGAGAGGCCTCCCGCCTGCTGTCCCGTGCAGAAGG
GGCAGCCATGACGCTTGGCGTGGATGCTCCCCGTATTTTGAGCGGCTCCAGCCTGAGCCAGGATATTGCGTCCATGCGGT
CCCAGCTTGAAAAATACAGCCAGGCAGAGGCTTTGGTGAAACGGGCTTATGAAGATGTGAATGTTGCCGCAGCTTTCCTG
AAGGCGCGGGATTACGATCAGGCGGTGAAGTATCTGGAGCAGGCAATGAAAGTGGCTCGTGAAAATACCACGTTTGTTCA
GGCTCTTCAGCCGGTCATTCTGAATCTTCAGGCGGAGATAAGCGCCGGCAGGGAACAATGGGCTCTGTCGGAGTCCCAAT
ATGGAAAGTTGATTGCGGAGTGGGATGCGTTGACTCCGGAAGATAAGGAAAAACTCCGGAACAATCTGGCCTCCATCCAG
TTGGGAGAGCTTTACAATGAAATTCACCGCAACTGGGCTGGTGTGTGCCTCAAGCAAAAACGAACCACAGAGGCCCGCAG
GGTGCTGGGGAAGATAGGAGAGGTGCCGGCTGAAGAACCGGAGAGGCCTGCTTCGCGCCGACGCCGCAGATAG

Upstream 100 bases:

>100_bases
ACTCCAGATCTTCACGGAGGTAGGATGCGAGGGGCTTCGTAAGACGTTGCGAGGCGTTTATTTTGCTTGATTTGTGCCGT
CTTTTTGGCTCAATGCCTGC

Downstream 100 bases:

>100_bases
CAGACCCCTTCCTTCAGTTAGGCCGTTCCTTTTTTGGAAAGGCAAAGTTCTCCATTGGCAGATGCCGGAGGGGCTCAGAG
TTCCCAGAGGCTCCGGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSSERHFSSKPYRPARKKKSYWKPVLFLILLGGLWFGYIQYWPTIEGWFKPTIHEVHSQTQAMGHLQDMLASWNGSDAEL
AQMASSVDKQVEWMNSPEARDSFAWLLAVEMDRRGMLKESEPMLAALLEKKLAASSSMAAEDHTRLLGVSLNWAREFARR
KHDAVAEKLYEVILKNTPEDQVSIRLACLEPLIHYAYDQARFERFSALCKQAVSPVMRSMLNKPEDVKSMVKILLLQDTL
PDKTTGLPGGTGSAIARELLTKFRLTANPDMGRIILNELKMPLNTRRKYSQEELKTMADQLEAALICFRAAETEMDCTPE
TMLALARVRMQMGDLREASRLLSRAEGAAMTLGVDAPRILSGSSLSQDIASMRSQLEKYSQAEALVKRAYEDVNVAAAFL
KARDYDQAVKYLEQAMKVARENTTFVQALQPVILNLQAEISAGREQWALSESQYGKLIAEWDALTPEDKEKLRNNLASIQ
LGELYNEIHRNWAGVCLKQKRTTEARRVLGKIGEVPAEEPERPASRRRRR

Sequences:

>Translated_530_residues
MSSERHFSSKPYRPARKKKSYWKPVLFLILLGGLWFGYIQYWPTIEGWFKPTIHEVHSQTQAMGHLQDMLASWNGSDAEL
AQMASSVDKQVEWMNSPEARDSFAWLLAVEMDRRGMLKESEPMLAALLEKKLAASSSMAAEDHTRLLGVSLNWAREFARR
KHDAVAEKLYEVILKNTPEDQVSIRLACLEPLIHYAYDQARFERFSALCKQAVSPVMRSMLNKPEDVKSMVKILLLQDTL
PDKTTGLPGGTGSAIARELLTKFRLTANPDMGRIILNELKMPLNTRRKYSQEELKTMADQLEAALICFRAAETEMDCTPE
TMLALARVRMQMGDLREASRLLSRAEGAAMTLGVDAPRILSGSSLSQDIASMRSQLEKYSQAEALVKRAYEDVNVAAAFL
KARDYDQAVKYLEQAMKVARENTTFVQALQPVILNLQAEISAGREQWALSESQYGKLIAEWDALTPEDKEKLRNNLASIQ
LGELYNEIHRNWAGVCLKQKRTTEARRVLGKIGEVPAEEPERPASRRRRR
>Mature_529_residues
SSERHFSSKPYRPARKKKSYWKPVLFLILLGGLWFGYIQYWPTIEGWFKPTIHEVHSQTQAMGHLQDMLASWNGSDAELA
QMASSVDKQVEWMNSPEARDSFAWLLAVEMDRRGMLKESEPMLAALLEKKLAASSSMAAEDHTRLLGVSLNWAREFARRK
HDAVAEKLYEVILKNTPEDQVSIRLACLEPLIHYAYDQARFERFSALCKQAVSPVMRSMLNKPEDVKSMVKILLLQDTLP
DKTTGLPGGTGSAIARELLTKFRLTANPDMGRIILNELKMPLNTRRKYSQEELKTMADQLEAALICFRAAETEMDCTPET
MLALARVRMQMGDLREASRLLSRAEGAAMTLGVDAPRILSGSSLSQDIASMRSQLEKYSQAEALVKRAYEDVNVAAAFLK
ARDYDQAVKYLEQAMKVARENTTFVQALQPVILNLQAEISAGREQWALSESQYGKLIAEWDALTPEDKEKLRNNLASIQL
GELYNEIHRNWAGVCLKQKRTTEARRVLGKIGEVPAEEPERPASRRRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60096; Mature: 59965

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSERHFSSKPYRPARKKKSYWKPVLFLILLGGLWFGYIQYWPTIEGWFKPTIHEVHSQT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAMGHLQDMLASWNGSDAELAQMASSVDKQVEWMNSPEARDSFAWLLAVEMDRRGMLKES
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCC
EPMLAALLEKKLAASSSMAAEDHTRLLGVSLNWAREFARRKHDAVAEKLYEVILKNTPED
CHHHHHHHHHHHHHHHHCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QVSIRLACLEPLIHYAYDQARFERFSALCKQAVSPVMRSMLNKPEDVKSMVKILLLQDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDKTTGLPGGTGSAIARELLTKFRLTANPDMGRIILNELKMPLNTRRKYSQEELKTMADQ
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
LEAALICFRAAETEMDCTPETMLALARVRMQMGDLREASRLLSRAEGAAMTLGVDAPRIL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
SGSSLSQDIASMRSQLEKYSQAEALVKRAYEDVNVAAAFLKARDYDQAVKYLEQAMKVAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ENTTFVQALQPVILNLQAEISAGREQWALSESQYGKLIAEWDALTPEDKEKLRNNLASIQ
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGELYNEIHRNWAGVCLKQKRTTEARRVLGKIGEVPAEEPERPASRRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
SSERHFSSKPYRPARKKKSYWKPVLFLILLGGLWFGYIQYWPTIEGWFKPTIHEVHSQT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAMGHLQDMLASWNGSDAELAQMASSVDKQVEWMNSPEARDSFAWLLAVEMDRRGMLKES
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCC
EPMLAALLEKKLAASSSMAAEDHTRLLGVSLNWAREFARRKHDAVAEKLYEVILKNTPED
CHHHHHHHHHHHHHHHHCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
QVSIRLACLEPLIHYAYDQARFERFSALCKQAVSPVMRSMLNKPEDVKSMVKILLLQDTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDKTTGLPGGTGSAIARELLTKFRLTANPDMGRIILNELKMPLNTRRKYSQEELKTMADQ
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
LEAALICFRAAETEMDCTPETMLALARVRMQMGDLREASRLLSRAEGAAMTLGVDAPRIL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
SGSSLSQDIASMRSQLEKYSQAEALVKRAYEDVNVAAAFLKARDYDQAVKYLEQAMKVAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ENTTFVQALQPVILNLQAEISAGREQWALSESQYGKLIAEWDALTPEDKEKLRNNLASIQ
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGELYNEIHRNWAGVCLKQKRTTEARRVLGKIGEVPAEEPERPASRRRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA