Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736185
Identifier: 187736185
GI number: 187736185
Start: 2063042
End: 2064511
Strand: Reverse
Name: 187736185
Synonym: Amuc_1698
Alternate gene names: NA
Gene position: 2064511-2063042 (Counterclockwise)
Preceding gene: 187736186
Following gene: 187736184
Centisome position: 77.49
GC content: 58.03
Gene sequence:
>1470_bases ATGACGCTTCCCCCCAAATTCCTGCTTGTCCTGTCCCTGTTCCAGATTTCCCTGGGGCTGGGCTGGATTCTGGGGTATGT GCTTCTTCCTCCTACCATTTTCTGTTATGAACAGGCAGCGGAACATTTGCTGGCTGAGGAATACCGGACTGTTCACCCGG AAGGGCTGAATACGGAAAACAGCATCGTCCTCCAGCCCTACGATTACTTCAACAAAGGGCAGACGGCCCAGCTTCCCGTG GTTTCCCTGCACCGGGAATCATCACTGAACAGTTTCGCCTCCTATCCTCCCAATCCCATGGATTACACAGTGCTGTTCCG GCACCTGTATGAACAGGGAGCCAGGAATGTTTACGTGATGTCCCCCATGACCTGGGAAGAAAAGCCGGACAGCATCGTCA AAGCCGCCGTGGGGTATGAACTGGACCGCTTCCTCCACAAGGCTCTGGGCCGGCAAATGAGCGAATCCGCCCGCCACTCG CCCCTTCCGCCGGATTGGAAAGACTTGATTATTCCCGCTTCCAACATCGTAGGAAAGACGGACCAGTTCCCGCGCGCGGA CAGGTTCGTAGGGAAACCTCCGCAAATAACCACGTCAGCCCCCTCCCTGGGAACCGTCGTGGAGAATAACGAGCTGTTTT CCCCAGCTCCGGAAAACAGGGTCTCCCTTCCGCTTTTCATCCGCTGGGGCGGGGATATCATTCCCACTCTTCCTCTGGTC GCCGCTCTGAATGCCCTGGATCTGAAACCCGGTGATGTCAGAATCATTCCGGGAGACACCCTTTTTCTGGGCGGCAAACG CTCCATTCCTCTGGATAAACACGGCCGCATCCCCCTGGCGGCAAACAGCAGCCCCACCATTCTGGACACCAAGGAAGTAA TCGTCCCCGTCATGTCCGGCCTGCGCCCGCCGGATACTACTGCCGTCAGAAAACTGCTTTCCTCTGCGGATGCGGTACTT GTTTCCGAACCATCCGCCCTTTCCGACACGCCGGACGCGCAATCCCTTCTGGCGGCGCAAACTGTCCGCAGCATCATGGG AGCGCTTGCCCCTGCCCCTGCCGTCCTGATTCCCATAGCCCCCGCCTGGGTACAATGGATCATCGTGCTGGATGTCCTGC TTCTGTCCGTATGGGCTTCGCGTTTCCAACGCAGAGGGCGCTTCATCACCTGGGGCCTCTGTATCCTGTTCGTTCCGTTC ATTGCATGGTACCTGTTTTCCGCTCATGATACATGGTTCCCCGTCATGACTCCCGTAACGGCGGTGCTGTGCGTAGCCCT GGCGTGCAGTCTGTTCCCCCAGCTTTCCCCCCCCTCCCGCGATGCAGAGGATGAAGATGAAGAAGACGACGCCCCCCCCT CGTCGGAAGGCAGCGGAGCCGGCTATGTGCTGCCCCCGGACAACTTGTATCAGGAACCCAACGAAGTACCTATCCCCCAT CACTCCAAAAGAGAACGCCCCGACTCATGA
Upstream 100 bases:
>100_bases GATTCCCGCCGGGCTGGGACACCTGCGGAAGCTTCTGCCCGGCTCCACGCTTGCAGAACCGCTGGCTGCTATGCTAGCAT GATTTTTCCCAGCCCCTCTG
Downstream 100 bases:
>100_bases CACAGCGCAAGCACATCCTCTTCATCTGCACCGGCAACACCTGCCGCAGCCCCATGGCGGAAGGCCTGTTCCGGAAACTT TCCGCGCACCATCCGGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTLPPKFLLVLSLFQISLGLGWILGYVLLPPTIFCYEQAAEHLLAEEYRTVHPEGLNTENSIVLQPYDYFNKGQTAQLPV VSLHRESSLNSFASYPPNPMDYTVLFRHLYEQGARNVYVMSPMTWEEKPDSIVKAAVGYELDRFLHKALGRQMSESARHS PLPPDWKDLIIPASNIVGKTDQFPRADRFVGKPPQITTSAPSLGTVVENNELFSPAPENRVSLPLFIRWGGDIIPTLPLV AALNALDLKPGDVRIIPGDTLFLGGKRSIPLDKHGRIPLAANSSPTILDTKEVIVPVMSGLRPPDTTAVRKLLSSADAVL VSEPSALSDTPDAQSLLAAQTVRSIMGALAPAPAVLIPIAPAWVQWIIVLDVLLLSVWASRFQRRGRFITWGLCILFVPF IAWYLFSAHDTWFPVMTPVTAVLCVALACSLFPQLSPPSRDAEDEDEEDDAPPSSEGSGAGYVLPPDNLYQEPNEVPIPH HSKRERPDS
Sequences:
>Translated_489_residues MTLPPKFLLVLSLFQISLGLGWILGYVLLPPTIFCYEQAAEHLLAEEYRTVHPEGLNTENSIVLQPYDYFNKGQTAQLPV VSLHRESSLNSFASYPPNPMDYTVLFRHLYEQGARNVYVMSPMTWEEKPDSIVKAAVGYELDRFLHKALGRQMSESARHS PLPPDWKDLIIPASNIVGKTDQFPRADRFVGKPPQITTSAPSLGTVVENNELFSPAPENRVSLPLFIRWGGDIIPTLPLV AALNALDLKPGDVRIIPGDTLFLGGKRSIPLDKHGRIPLAANSSPTILDTKEVIVPVMSGLRPPDTTAVRKLLSSADAVL VSEPSALSDTPDAQSLLAAQTVRSIMGALAPAPAVLIPIAPAWVQWIIVLDVLLLSVWASRFQRRGRFITWGLCILFVPF IAWYLFSAHDTWFPVMTPVTAVLCVALACSLFPQLSPPSRDAEDEDEEDDAPPSSEGSGAGYVLPPDNLYQEPNEVPIPH HSKRERPDS >Mature_488_residues TLPPKFLLVLSLFQISLGLGWILGYVLLPPTIFCYEQAAEHLLAEEYRTVHPEGLNTENSIVLQPYDYFNKGQTAQLPVV SLHRESSLNSFASYPPNPMDYTVLFRHLYEQGARNVYVMSPMTWEEKPDSIVKAAVGYELDRFLHKALGRQMSESARHSP LPPDWKDLIIPASNIVGKTDQFPRADRFVGKPPQITTSAPSLGTVVENNELFSPAPENRVSLPLFIRWGGDIIPTLPLVA ALNALDLKPGDVRIIPGDTLFLGGKRSIPLDKHGRIPLAANSSPTILDTKEVIVPVMSGLRPPDTTAVRKLLSSADAVLV SEPSALSDTPDAQSLLAAQTVRSIMGALAPAPAVLIPIAPAWVQWIIVLDVLLLSVWASRFQRRGRFITWGLCILFVPFI AWYLFSAHDTWFPVMTPVTAVLCVALACSLFPQLSPPSRDAEDEDEEDDAPPSSEGSGAGYVLPPDNLYQEPNEVPIPHH SKRERPDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53838; Mature: 53707
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPPKFLLVLSLFQISLGLGWILGYVLLPPTIFCYEQAAEHLLAEEYRTVHPEGLNTEN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SIVLQPYDYFNKGQTAQLPVVSLHRESSLNSFASYPPNPMDYTVLFRHLYEQGARNVYVM EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEE SPMTWEEKPDSIVKAAVGYELDRFLHKALGRQMSESARHSPLPPDWKDLIIPASNIVGKT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCHHHCCCC DQFPRADRFVGKPPQITTSAPSLGTVVENNELFSPAPENRVSLPLFIRWGGDIIPTLPLV CCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH AALNALDLKPGDVRIIPGDTLFLGGKRSIPLDKHGRIPLAANSSPTILDTKEVIVPVMSG HHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEECHHHHHHHHHHC LRPPDTTAVRKLLSSADAVLVSEPSALSDTPDAQSLLAAQTVRSIMGALAPAPAVLIPIA CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC PAWVQWIIVLDVLLLSVWASRFQRRGRFITWGLCILFVPFIAWYLFSAHDTWFPVMTPVT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AVLCVALACSLFPQLSPPSRDAEDEDEEDDAPPSSEGSGAGYVLPPDNLYQEPNEVPIPH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCC HSKRERPDS CCCCCCCCC >Mature Secondary Structure TLPPKFLLVLSLFQISLGLGWILGYVLLPPTIFCYEQAAEHLLAEEYRTVHPEGLNTEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SIVLQPYDYFNKGQTAQLPVVSLHRESSLNSFASYPPNPMDYTVLFRHLYEQGARNVYVM EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEE SPMTWEEKPDSIVKAAVGYELDRFLHKALGRQMSESARHSPLPPDWKDLIIPASNIVGKT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCHHHCCCC DQFPRADRFVGKPPQITTSAPSLGTVVENNELFSPAPENRVSLPLFIRWGGDIIPTLPLV CCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH AALNALDLKPGDVRIIPGDTLFLGGKRSIPLDKHGRIPLAANSSPTILDTKEVIVPVMSG HHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEECHHHHHHHHHHC LRPPDTTAVRKLLSSADAVLVSEPSALSDTPDAQSLLAAQTVRSIMGALAPAPAVLIPIA CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC PAWVQWIIVLDVLLLSVWASRFQRRGRFITWGLCILFVPFIAWYLFSAHDTWFPVMTPVT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AVLCVALACSLFPQLSPPSRDAEDEDEEDDAPPSSEGSGAGYVLPPDNLYQEPNEVPIPH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCC HSKRERPDS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA