Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is ywlE [H]

Identifier: 187736184

GI number: 187736184

Start: 2062590

End: 2063045

Strand: Reverse

Name: ywlE [H]

Synonym: Amuc_1697

Alternate gene names: 187736184

Gene position: 2063045-2062590 (Counterclockwise)

Preceding gene: 187736185

Following gene: 187736183

Centisome position: 77.44

GC content: 61.4

Gene sequence:

>456_bases
ATGACACAGCGCAAGCACATCCTCTTCATCTGCACCGGCAACACCTGCCGCAGCCCCATGGCGGAAGGCCTGTTCCGGAA
ACTTTCCGCGCACCATCCGGAATGGCAGGCCGGTTCCGCAGGAACAGCCGCATGGCCCGGGCAGGCAGCCAGTCCGGAAA
CGCTCCACGTCCTCCGGGAGCATGGCGTCAATCTCTCCAGCCATGAAAGCCGCCCTGTTACGGATGAACTGATGAAAAAC
GCCACAGATGTCTACGCCATGACGGAAAGCCACCTGGCCGCCCTGCTTGCCAATTTCCCCGAACATGCGGACAAGGTCAG
GCTGGTCACCTGCTACACGGGCAACCGCGGCATCGCCGACCCCATCGGCTGCGGACAGACAGCCTACAACAATGTAGCGC
GGCAATTGACAACCGCCATCCAGGCCATCATTGCCCGGATGGAGCAACAGGAGTAG

Upstream 100 bases:

>100_bases
AAGGCAGCGGAGCCGGCTATGTGCTGCCCCCGGACAACTTGTATCAGGAACCCAACGAAGTACCTATCCCCCATCACTCC
AAAAGAGAACGCCCCGACTC

Downstream 100 bases:

>100_bases
CAACATCTTTGACTCCTTCCCCCGTCATGGCTTCCCCTTCCATACGCATTAATCTGCCCCGCCAGGAACTGGTGCTGGAA
AAATCCGGAAAAATCCTGCT

Product: protein tyrosine phosphatase

Products: NA

Alternate protein names: LMPTP [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTQRKHILFICTGNTCRSPMAEGLFRKLSAHHPEWQAGSAGTAAWPGQAASPETLHVLREHGVNLSSHESRPVTDELMKN
ATDVYAMTESHLAALLANFPEHADKVRLVTCYTGNRGIADPIGCGQTAYNNVARQLTTAIQAIIARMEQQE

Sequences:

>Translated_151_residues
MTQRKHILFICTGNTCRSPMAEGLFRKLSAHHPEWQAGSAGTAAWPGQAASPETLHVLREHGVNLSSHESRPVTDELMKN
ATDVYAMTESHLAALLANFPEHADKVRLVTCYTGNRGIADPIGCGQTAYNNVARQLTTAIQAIIARMEQQE
>Mature_150_residues
TQRKHILFICTGNTCRSPMAEGLFRKLSAHHPEWQAGSAGTAAWPGQAASPETLHVLREHGVNLSSHESRPVTDELMKNA
TDVYAMTESHLAALLANFPEHADKVRLVTCYTGNRGIADPIGCGQTAYNNVARQLTTAIQAIIARMEQQE

Specific function: Dephosphorylates the phosphotyrosine-containing proteins. Involved in ethanol stress resistance [H]

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1788375, Length=144, Percent_Identity=32.6388888888889, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI87081812, Length=143, Percent_Identity=33.5664335664336, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 16508; Mature: 16377

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRKHILFICTGNTCRSPMAEGLFRKLSAHHPEWQAGSAGTAAWPGQAASPETLHVLRE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
HGVNLSSHESRPVTDELMKNATDVYAMTESHLAALLANFPEHADKVRLVTCYTGNRGIAD
HCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
PIGCGQTAYNNVARQLTTAIQAIIARMEQQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQRKHILFICTGNTCRSPMAEGLFRKLSAHHPEWQAGSAGTAAWPGQAASPETLHVLRE
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
HGVNLSSHESRPVTDELMKNATDVYAMTESHLAALLANFPEHADKVRLVTCYTGNRGIAD
HCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
PIGCGQTAYNNVARQLTTAIQAIIARMEQQE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798145; 9384377 [H]