Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736160

Identifier: 187736160

GI number: 187736160

Start: 2027551

End: 2028651

Strand: Reverse

Name: 187736160

Synonym: Amuc_1673

Alternate gene names: NA

Gene position: 2028651-2027551 (Counterclockwise)

Preceding gene: 187736162

Following gene: 187736159

Centisome position: 76.15

GC content: 52.95

Gene sequence:

>1101_bases
ATGACTTCGTTGCCAGCTTCTTCATTGGTTGAAACAGTAGCCAATAAAATCAAACAGATGATTCTCAGCGGTAGCCTGGT
CAATATCCTGCCCGGAGAAAGAGAACTCGGGCACAGGTTATCCGTAGGCAGGGAAACCATCAGAAAGGCCCTGACCCTTC
TGGAAAGGGATGCATGGATTGCCCCCCCACGCATCAAGGTTCCGAGGCGCATCCTGAAAACTACGGAAGAAGAAACGGTT
AAAAATATCTTCTGCCATCCGGTTCAGGAAAAAAAAGAAATTCTCGGATTTCTGACGCCCCAGCCCCTCAAAAGGCTGGC
TCAAAGCGTATTGGCGGAGATATATACCATCTCCAAAATTCTGGAGGAAGACGGCATCAGCGTCCGTATCTTTGAAGCTC
CCTGGATCTTAGGCAATAACCCGGACAAGAGGCTTGCCAAGCTTGTTACCAAATCCGAATGCGTCTGCTGGATACTTCAC
CGTTCCTCGGAGCAAACCCAGCTCTGGTTCAAGACGCACCGCATCCCCTGCATTGTGCGCGGCACCTCCTACCAGAGCAG
CAACCTTCCCTATCTGGACCGCCACTGGGCGGCCACCACGCATCATGCGGCGCAGCACCTTTGGAACAAGGGGCACCGAA
CGGTAGGCCTGTGCCTGCCTCCTGATCCGTTGAAGGGCCACCAGCTCATGCAAAAAGGTTTTTTCAGCTTTGCGGAACAG
GGATGGAATCCCATCCTGGTTCCCACCCCGTTTGAAACGCCTCTCTTCTTTGAATACCTGGCCAAAGCGTTTAAAGAACA
TCCGGATATGTCCGCCCTGGTAGCCACACGGGGCAACCAGATCGTTCCCATCCTTTCCTGGGTGGAAGCCCGTTCGCTGA
GCATTCCGGATCAGCTCAGCCTGGTCAGCCTGACGTATGAACCCTTCATGGAACGCCTGCTGCCCACGATCACCTATTAT
GAAGAGAACCAGACAAAAACGGTTCACAAGCTCATACGGATGCTCCGCTCCCTGACAGCCGGAAAAAATATCAAGAGCAT
TTCCGTCATTCCGGAAATATACCCCGGCCAATCCGTTTCCCTGCACGCACCTTCCGCATAA

Upstream 100 bases:

>100_bases
ACAACTTGCAACAACACCAGCTCTCCTTTTGGATTCTGCGGGGCAGGCAATCCCTACAATTGGCTCGAATTCACGCAATG
CGATACGTATATACAAGAGT

Downstream 100 bases:

>100_bases
TGCCTTTTTCCGGAAAGGAAAGAATCAAGGGAACAGGAAAACATCAACAGTCAAATATCCTGGCAGCAGGCAAAGAAGAA
TTCCTGCAGAAGACAGAATC

Product: regulatory protein GntR HTH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTSLPASSLVETVANKIKQMILSGSLVNILPGERELGHRLSVGRETIRKALTLLERDAWIAPPRIKVPRRILKTTEEETV
KNIFCHPVQEKKEILGFLTPQPLKRLAQSVLAEIYTISKILEEDGISVRIFEAPWILGNNPDKRLAKLVTKSECVCWILH
RSSEQTQLWFKTHRIPCIVRGTSYQSSNLPYLDRHWAATTHHAAQHLWNKGHRTVGLCLPPDPLKGHQLMQKGFFSFAEQ
GWNPILVPTPFETPLFFEYLAKAFKEHPDMSALVATRGNQIVPILSWVEARSLSIPDQLSLVSLTYEPFMERLLPTITYY
EENQTKTVHKLIRMLRSLTAGKNIKSISVIPEIYPGQSVSLHAPSA

Sequences:

>Translated_366_residues
MTSLPASSLVETVANKIKQMILSGSLVNILPGERELGHRLSVGRETIRKALTLLERDAWIAPPRIKVPRRILKTTEEETV
KNIFCHPVQEKKEILGFLTPQPLKRLAQSVLAEIYTISKILEEDGISVRIFEAPWILGNNPDKRLAKLVTKSECVCWILH
RSSEQTQLWFKTHRIPCIVRGTSYQSSNLPYLDRHWAATTHHAAQHLWNKGHRTVGLCLPPDPLKGHQLMQKGFFSFAEQ
GWNPILVPTPFETPLFFEYLAKAFKEHPDMSALVATRGNQIVPILSWVEARSLSIPDQLSLVSLTYEPFMERLLPTITYY
EENQTKTVHKLIRMLRSLTAGKNIKSISVIPEIYPGQSVSLHAPSA
>Mature_365_residues
TSLPASSLVETVANKIKQMILSGSLVNILPGERELGHRLSVGRETIRKALTLLERDAWIAPPRIKVPRRILKTTEEETVK
NIFCHPVQEKKEILGFLTPQPLKRLAQSVLAEIYTISKILEEDGISVRIFEAPWILGNNPDKRLAKLVTKSECVCWILHR
SSEQTQLWFKTHRIPCIVRGTSYQSSNLPYLDRHWAATTHHAAQHLWNKGHRTVGLCLPPDPLKGHQLMQKGFFSFAEQG
WNPILVPTPFETPLFFEYLAKAFKEHPDMSALVATRGNQIVPILSWVEARSLSIPDQLSLVSLTYEPFMERLLPTITYYE
ENQTKTVHKLIRMLRSLTAGKNIKSISVIPEIYPGQSVSLHAPSA

Specific function: Unknown

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41527; Mature: 41396

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPASSLVETVANKIKQMILSGSLVNILPGERELGHRLSVGRETIRKALTLLERDAWI
CCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
APPRIKVPRRILKTTEEETVKNIFCHPVQEKKEILGFLTPQPLKRLAQSVLAEIYTISKI
CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LEEDGISVRIFEAPWILGNNPDKRLAKLVTKSECVCWILHRSSEQTQLWFKTHRIPCIVR
HHHCCCEEEEEECCEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCEEHHEECCCEEEEE
GTSYQSSNLPYLDRHWAATTHHAAQHLWNKGHRTVGLCLPPDPLKGHQLMQKGFFSFAEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
GWNPILVPTPFETPLFFEYLAKAFKEHPDMSALVATRGNQIVPILSWVEARSLSIPDQLS
CCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHCCCCCCCHH
LVSLTYEPFMERLLPTITYYEENQTKTVHKLIRMLRSLTAGKNIKSISVIPEIYPGQSVS
HEEEEHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEE
LHAPSA
EECCCC
>Mature Secondary Structure 
TSLPASSLVETVANKIKQMILSGSLVNILPGERELGHRLSVGRETIRKALTLLERDAWI
CCCCHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
APPRIKVPRRILKTTEEETVKNIFCHPVQEKKEILGFLTPQPLKRLAQSVLAEIYTISKI
CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LEEDGISVRIFEAPWILGNNPDKRLAKLVTKSECVCWILHRSSEQTQLWFKTHRIPCIVR
HHHCCCEEEEEECCEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCEEHHEECCCEEEEE
GTSYQSSNLPYLDRHWAATTHHAAQHLWNKGHRTVGLCLPPDPLKGHQLMQKGFFSFAEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
GWNPILVPTPFETPLFFEYLAKAFKEHPDMSALVATRGNQIVPILSWVEARSLSIPDQLS
CCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHCCCCCCCHH
LVSLTYEPFMERLLPTITYYEENQTKTVHKLIRMLRSLTAGKNIKSISVIPEIYPGQSVS
HEEEEHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEE
LHAPSA
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA