Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736159

Identifier: 187736159

GI number: 187736159

Start: 2026505

End: 2027416

Strand: Reverse

Name: 187736159

Synonym: Amuc_1672

Alternate gene names: NA

Gene position: 2027416-2026505 (Counterclockwise)

Preceding gene: 187736160

Following gene: 187736158

Centisome position: 76.1

GC content: 54.82

Gene sequence:

>912_bases
ATGATTGTTTCCGTACTTCCACGCTCTGCACGTTTTTTCCTCTTTTCATGGCTGCTTTGCTCCCTGACGGTCTTTCCGGC
GCCACCCCTGCATGCGGATGAAGTCAACGTCATCCTTATCGGCGGACAGTCAAACGCCACAGGGCAAGGGTACGTCAACA
ACATTCCTCCCTGCTTCAAAACGGATAAACGGATTCTTCTGTACTATTCCGGCTCCCTCAAAGGGACAGAACCGGCAGAA
CAGCTTGTTCCCTTGAGCCCGGCATCCGAATCCCCCGACCGTTTTGGCGTGGAACTAAGCCTGGGAACAGCGTTGCAGAA
AAAATTCCCGCAAAAAAAATGGGCCATCATCAAGCACGCCCGGAGCGGAAGCAACCTTTTCCGGCAATGGAACCCAGGAA
AAACTTCTCAGGATAAGCAGGGGGAAGAATACGTCAAATTGCTCCGTACCGTCCGCAACGGAATGGAAGCCCTGAAAAAG
CAGGGACATGCTCCTGTCCTGAAAGCCATGGTGTGGCAACAGGGGGAAGGAGACGCAAGGGACATTGCCGGCATCAAAAA
CGCTCTGTCTTACGGCGCCAACCTGAACAACCTGATTAAACGCATCAGAGCGGATCTGGAAGCCCCCGGTCTGGCCTTTA
TCTACGGCAGCGTTCTTCCCGTGCCCGCTCTGGCCCGTTTTCCGGGCAGGGAAAAAGTGCGGCAGGGGCAAAAGGATGTG
GCGGAAGAATCCCGTACCTCCCTCTCCGTCAACAATGCGGTTTATGTCCCCGCAGATGATCTCCAGCTGCGCAGCATGGA
CTTCCGCACCCCCTATCCCACGGATACCGTCCATCTGGGCACGCATGGAGTTCTAGTCCTGGGAGAACGCTTTGCCTCCG
CATTGGAAAAGCTCTGGGGACAAAAAAACTGA

Upstream 100 bases:

>100_bases
AGGAAAACATCAACAGTCAAATATCCTGGCAGCAGGCAAAGAAGAATTCCTGCAGAAGACAGAATCTTCTTTCGGGAAAC
GTATCAGGGATATCCCCGCC

Downstream 100 bases:

>100_bases
CACCCCTGCTCTTTTTTCTTCCCCACTTTCTCCAGCCCCGGCAGCCCCATCCGGAAAACCAATAATGTTTGACATCCCTC
CGGGCTGCGGATAGGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE
QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK
QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV
AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN

Sequences:

>Translated_303_residues
MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE
QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK
QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV
AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN
>Mature_303_residues
MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE
QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK
QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV
AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.6.13

Molecular weight: Translated: 33408; Mature: 33408

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFK
CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
TDKRILLYYSGSLKGTEPAEQLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHA
CCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHC
RSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKKQGHAPVLKAMVWQQGEGDAR
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
DIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCCHHHHCCCHHHHHHHHHHH
AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWG
HHHHHCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCC
QKN
CCC
>Mature Secondary Structure
MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFK
CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
TDKRILLYYSGSLKGTEPAEQLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHA
CCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHC
RSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKKQGHAPVLKAMVWQQGEGDAR
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
DIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCCHHHHCCCHHHHHHHHHHH
AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWG
HHHHHCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCC
QKN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA