Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736159
Identifier: 187736159
GI number: 187736159
Start: 2026505
End: 2027416
Strand: Reverse
Name: 187736159
Synonym: Amuc_1672
Alternate gene names: NA
Gene position: 2027416-2026505 (Counterclockwise)
Preceding gene: 187736160
Following gene: 187736158
Centisome position: 76.1
GC content: 54.82
Gene sequence:
>912_bases ATGATTGTTTCCGTACTTCCACGCTCTGCACGTTTTTTCCTCTTTTCATGGCTGCTTTGCTCCCTGACGGTCTTTCCGGC GCCACCCCTGCATGCGGATGAAGTCAACGTCATCCTTATCGGCGGACAGTCAAACGCCACAGGGCAAGGGTACGTCAACA ACATTCCTCCCTGCTTCAAAACGGATAAACGGATTCTTCTGTACTATTCCGGCTCCCTCAAAGGGACAGAACCGGCAGAA CAGCTTGTTCCCTTGAGCCCGGCATCCGAATCCCCCGACCGTTTTGGCGTGGAACTAAGCCTGGGAACAGCGTTGCAGAA AAAATTCCCGCAAAAAAAATGGGCCATCATCAAGCACGCCCGGAGCGGAAGCAACCTTTTCCGGCAATGGAACCCAGGAA AAACTTCTCAGGATAAGCAGGGGGAAGAATACGTCAAATTGCTCCGTACCGTCCGCAACGGAATGGAAGCCCTGAAAAAG CAGGGACATGCTCCTGTCCTGAAAGCCATGGTGTGGCAACAGGGGGAAGGAGACGCAAGGGACATTGCCGGCATCAAAAA CGCTCTGTCTTACGGCGCCAACCTGAACAACCTGATTAAACGCATCAGAGCGGATCTGGAAGCCCCCGGTCTGGCCTTTA TCTACGGCAGCGTTCTTCCCGTGCCCGCTCTGGCCCGTTTTCCGGGCAGGGAAAAAGTGCGGCAGGGGCAAAAGGATGTG GCGGAAGAATCCCGTACCTCCCTCTCCGTCAACAATGCGGTTTATGTCCCCGCAGATGATCTCCAGCTGCGCAGCATGGA CTTCCGCACCCCCTATCCCACGGATACCGTCCATCTGGGCACGCATGGAGTTCTAGTCCTGGGAGAACGCTTTGCCTCCG CATTGGAAAAGCTCTGGGGACAAAAAAACTGA
Upstream 100 bases:
>100_bases AGGAAAACATCAACAGTCAAATATCCTGGCAGCAGGCAAAGAAGAATTCCTGCAGAAGACAGAATCTTCTTTCGGGAAAC GTATCAGGGATATCCCCGCC
Downstream 100 bases:
>100_bases CACCCCTGCTCTTTTTTCTTCCCCACTTTCTCCAGCCCCGGCAGCCCCATCCGGAAAACCAATAATGTTTGACATCCCTC CGGGCTGCGGATAGGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN
Sequences:
>Translated_303_residues MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN >Mature_303_residues MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFKTDKRILLYYSGSLKGTEPAE QLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHARSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKK QGHAPVLKAMVWQQGEGDARDIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWGQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.6.13
Molecular weight: Translated: 33408; Mature: 33408
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFK CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC TDKRILLYYSGSLKGTEPAEQLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHA CCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHC RSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKKQGHAPVLKAMVWQQGEGDAR CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH DIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCCHHHHCCCHHHHHHHHHHH AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWG HHHHHCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCC QKN CCC >Mature Secondary Structure MIVSVLPRSARFFLFSWLLCSLTVFPAPPLHADEVNVILIGGQSNATGQGYVNNIPPCFK CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC TDKRILLYYSGSLKGTEPAEQLVPLSPASESPDRFGVELSLGTALQKKFPQKKWAIIKHA CCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHC RSGSNLFRQWNPGKTSQDKQGEEYVKLLRTVRNGMEALKKQGHAPVLKAMVWQQGEGDAR CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH DIAGIKNALSYGANLNNLIKRIRADLEAPGLAFIYGSVLPVPALARFPGREKVRQGQKDV HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHCCCCCCHHHHCCCHHHHHHHHHHH AEESRTSLSVNNAVYVPADDLQLRSMDFRTPYPTDTVHLGTHGVLVLGERFASALEKLWG HHHHHCEEEECCEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHCC QKN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA