Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is nahA [H]
Identifier: 187736156
GI number: 187736156
Start: 2021876
End: 2023519
Strand: Direct
Name: nahA [H]
Synonym: Amuc_1669
Alternate gene names: 187736156
Gene position: 2021876-2023519 (Clockwise)
Preceding gene: 187736154
Following gene: 187736161
Centisome position: 75.89
GC content: 53.71
Gene sequence:
>1644_bases ATGATGTTCAGACATGTTTCCCATGTGTTTCTTTTTCTGTTTTCCGGCTTATGCGGCACGGCCGTGAATGCTCAGGATCA GATAATACCCCGGCCCGTGTCCGTGAAGGTAGAGGCCAAGGGGGCGGCAACGCCCGTGAAGCTGGGTGAAGGAATGCGCA TTATATGCAAGGAGAAGGACGGGGAGTTCCGGCGCCAGGCTCACTTGTTGCAGCAGTTTTTGTCACGCGGAACCGGATTG GCTCTGGACGGGGCTGGCGGTACGGGAATAATCCGCGTTGTGAAGGACGCTGCCCTGAAGCAGTACGGGCCGGAGGCATA CCGTTTGGAAGCGGCTCCCGGAAATATCGTCATCAGCGCCGCGACTCCCAAAGGAGTTTATTATGCGGGGCAAAGTCTGG CGCAGATGCTGCCTGCCGCCTTTTTCAACAATGATGCGGACAAAAAGAGCGTAAGTTGGAATGTAGCGGAGAAGCCTTTT TCCATATTGGATTATCCCCGTTTTGCCTGGCGAGCCTTCATGCTGGATGAAGCACGGCATTTTTTTGGAGAGGAGGAGGT GAAGAGGCTGATTGACCAAATGGGGCTCCTGAAAATGAATGTCCTGCACTGGCATTTGTCGGATGATGCCGGATGGCGCA TCCAGATTAAAAAATATCCCAAACTGACATCCGTGGGAGGCAAGAGGAGAGATACGGAGATAGAGACGTGGGGAAGCGGC AAGTATGAAGGCAGGCCCCATGAAGGCTTTTATACGCAGGAACAGGTCAGGCGCATTGTCCGGTATGCGGCCGACAGGAA TATAACGATTGTTCCTGAAATAGATATTCCGGGCCATTCCGCCGCCGCCATCGTTTCCTATCCGGAGTTGAAATTGTCCG CCAGGCCTTTCGCGGAAGTGCCCGTGAGTTTCAATGACGGAGCGGCGTTTGATCCCACCAGCGAACGTACCTACCAGTTC CTGGGAGACATCATGACAGAGCTGGCTTCCCTCTTTCCCGGAGGTATCATTCACATCGGCGGTGACGAGGTGCGGTACAA AAAGTACTGGGAAGGCGTGCCCCACATTGAGGCGTTCATGAAGAAAAAAGGCATTAAGACTTTTCCCGACCTTCAAATCA TGTTTACGAATCGGATTTCCGGCATGCTGGCTGGGATGGGGCGCCGGATGATGGGGTGGAATGAAATACTGGGGTCCGAC GTGCACAATGACGGCGGCCGGGGAGCTGCGCTCGGCAAGCTGGATGCAAATGCTATCATTCATTTCTGGTATGGGTCCGA TAAAATTGCCGCCAAGGCGATCAGGGAAGGCCGCCAGGTGGTGAATTCCACTTCCCACATGACTTACATTAACAAAGGAT ATGACAAGCTCCCTCTGTCCAGGTCCTATTCTTTTGAGCCCGTTTTTGCGGGATTGAACCCGGAGCAGCAGAAGAATGTC ATCGGGCTGGGCTGCCAGGTCTGGACGGAATGGATTGCGGACGTGGAGAAACTGCACCGTCATGTATTTCCCCGTATTGC CGCTTATGCGGAGACGGGGTGGACCCGGAAGGAGGATAAGAATTTTCAGGATTTCCAGAGGCGTTTGACGGGGTATGAAA AAATTTTGGATGCCCAGGGCATCCGGCACGGTGAAAAGGAGTAG
Upstream 100 bases:
>100_bases CGGCACTTCGTGGAGAGGATGTTGCACCCCGGTTTTGACGGGTGGAAGAGAAACTGGGGAGAAAAGGAAAGATTCCTGGG AAAAACAGTGTATATTGAAC
Downstream 100 bases:
>100_bases TTGAAAAATTCGCCGCCGGGGATGAAGCGTCCTGGCTGAGTCAACAGTAAACCCGCTTGTTACTTGGTTAAGGATTCGGG AGAGTTCCTGTCAATGGCTT
Product: Beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MMFRHVSHVFLFLFSGLCGTAVNAQDQIIPRPVSVKVEAKGAATPVKLGEGMRIICKEKDGEFRRQAHLLQQFLSRGTGL ALDGAGGTGIIRVVKDAALKQYGPEAYRLEAAPGNIVISAATPKGVYYAGQSLAQMLPAAFFNNDADKKSVSWNVAEKPF SILDYPRFAWRAFMLDEARHFFGEEEVKRLIDQMGLLKMNVLHWHLSDDAGWRIQIKKYPKLTSVGGKRRDTEIETWGSG KYEGRPHEGFYTQEQVRRIVRYAADRNITIVPEIDIPGHSAAAIVSYPELKLSARPFAEVPVSFNDGAAFDPTSERTYQF LGDIMTELASLFPGGIIHIGGDEVRYKKYWEGVPHIEAFMKKKGIKTFPDLQIMFTNRISGMLAGMGRRMMGWNEILGSD VHNDGGRGAALGKLDANAIIHFWYGSDKIAAKAIREGRQVVNSTSHMTYINKGYDKLPLSRSYSFEPVFAGLNPEQQKNV IGLGCQVWTEWIADVEKLHRHVFPRIAAYAETGWTRKEDKNFQDFQRRLTGYEKILDAQGIRHGEKE
Sequences:
>Translated_547_residues MMFRHVSHVFLFLFSGLCGTAVNAQDQIIPRPVSVKVEAKGAATPVKLGEGMRIICKEKDGEFRRQAHLLQQFLSRGTGL ALDGAGGTGIIRVVKDAALKQYGPEAYRLEAAPGNIVISAATPKGVYYAGQSLAQMLPAAFFNNDADKKSVSWNVAEKPF SILDYPRFAWRAFMLDEARHFFGEEEVKRLIDQMGLLKMNVLHWHLSDDAGWRIQIKKYPKLTSVGGKRRDTEIETWGSG KYEGRPHEGFYTQEQVRRIVRYAADRNITIVPEIDIPGHSAAAIVSYPELKLSARPFAEVPVSFNDGAAFDPTSERTYQF LGDIMTELASLFPGGIIHIGGDEVRYKKYWEGVPHIEAFMKKKGIKTFPDLQIMFTNRISGMLAGMGRRMMGWNEILGSD VHNDGGRGAALGKLDANAIIHFWYGSDKIAAKAIREGRQVVNSTSHMTYINKGYDKLPLSRSYSFEPVFAGLNPEQQKNV IGLGCQVWTEWIADVEKLHRHVFPRIAAYAETGWTRKEDKNFQDFQRRLTGYEKILDAQGIRHGEKE >Mature_547_residues MMFRHVSHVFLFLFSGLCGTAVNAQDQIIPRPVSVKVEAKGAATPVKLGEGMRIICKEKDGEFRRQAHLLQQFLSRGTGL ALDGAGGTGIIRVVKDAALKQYGPEAYRLEAAPGNIVISAATPKGVYYAGQSLAQMLPAAFFNNDADKKSVSWNVAEKPF SILDYPRFAWRAFMLDEARHFFGEEEVKRLIDQMGLLKMNVLHWHLSDDAGWRIQIKKYPKLTSVGGKRRDTEIETWGSG KYEGRPHEGFYTQEQVRRIVRYAADRNITIVPEIDIPGHSAAAIVSYPELKLSARPFAEVPVSFNDGAAFDPTSERTYQF LGDIMTELASLFPGGIIHIGGDEVRYKKYWEGVPHIEAFMKKKGIKTFPDLQIMFTNRISGMLAGMGRRMMGWNEILGSD VHNDGGRGAALGKLDANAIIHFWYGSDKIAAKAIREGRQVVNSTSHMTYINKGYDKLPLSRSYSFEPVFAGLNPEQQKNV IGLGCQVWTEWIADVEKLHRHVFPRIAAYAETGWTRKEDKNFQDFQRRLTGYEKILDAQGIRHGEKE
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=386, Percent_Identity=27.4611398963731, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI189181666, Length=404, Percent_Identity=26.4851485148515, Blast_Score=146, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17569815, Length=437, Percent_Identity=26.5446224256293, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24657468, Length=458, Percent_Identity=24.0174672489083, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17647501, Length=458, Percent_Identity=24.0174672489083, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI281365639, Length=459, Percent_Identity=23.9651416122004, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24657474, Length=459, Percent_Identity=23.9651416122004, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17933586, Length=539, Percent_Identity=24.30426716141, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653074, Length=414, Percent_Identity=26.0869565217391, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI45551090, Length=411, Percent_Identity=26.0340632603406, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 61437; Mature: 61437
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFRHVSHVFLFLFSGLCGTAVNAQDQIIPRPVSVKVEAKGAATPVKLGEGMRIICKEKD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEECCC GEFRRQAHLLQQFLSRGTGLALDGAGGTGIIRVVKDAALKQYGPEAYRLEAAPGNIVISA CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE ATPKGVYYAGQSLAQMLPAAFFNNDADKKSVSWNVAEKPFSILDYPRFAWRAFMLDEARH CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHCCCHHHHHHHHHHHHHH FFGEEEVKRLIDQMGLLKMNVLHWHLSDDAGWRIQIKKYPKLTSVGGKRRDTEIETWGSG HCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCC KYEGRPHEGFYTQEQVRRIVRYAADRNITIVPEIDIPGHSAAAIVSYPELKLSARPFAEV CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCHHHC PVSFNDGAAFDPTSERTYQFLGDIMTELASLFPGGIIHIGGDEVRYKKYWEGVPHIEAFM CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHHHH KKKGIKTFPDLQIMFTNRISGMLAGMGRRMMGWNEILGSDVHNDGGRGAALGKLDANAII HHCCCCCCCCEEEEEHHHHHHHHHHHCHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEE HFWYGSDKIAAKAIREGRQVVNSTSHMTYINKGYDKLPLSRSYSFEPVFAGLNPEQQKNV EEEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCEEEECCCCHHHCCE IGLGCQVWTEWIADVEKLHRHVFPRIAAYAETGWTRKEDKNFQDFQRRLTGYEKILDAQG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IRHGEKE CCCCCCC >Mature Secondary Structure MMFRHVSHVFLFLFSGLCGTAVNAQDQIIPRPVSVKVEAKGAATPVKLGEGMRIICKEKD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEECCC GEFRRQAHLLQQFLSRGTGLALDGAGGTGIIRVVKDAALKQYGPEAYRLEAAPGNIVISA CHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE ATPKGVYYAGQSLAQMLPAAFFNNDADKKSVSWNVAEKPFSILDYPRFAWRAFMLDEARH CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHCCCHHHHHHHHHHHHHH FFGEEEVKRLIDQMGLLKMNVLHWHLSDDAGWRIQIKKYPKLTSVGGKRRDTEIETWGSG HCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCC KYEGRPHEGFYTQEQVRRIVRYAADRNITIVPEIDIPGHSAAAIVSYPELKLSARPFAEV CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCHHHC PVSFNDGAAFDPTSERTYQFLGDIMTELASLFPGGIIHIGGDEVRYKKYWEGVPHIEAFM CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHHHH KKKGIKTFPDLQIMFTNRISGMLAGMGRRMMGWNEILGSDVHNDGGRGAALGKLDANAII HHCCCCCCCCEEEEEHHHHHHHHHHHCHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEE HFWYGSDKIAAKAIREGRQVVNSTSHMTYINKGYDKLPLSRSYSFEPVFAGLNPEQQKNV EEEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCCCEEEECCCCHHHCCE IGLGCQVWTEWIADVEKLHRHVFPRIAAYAETGWTRKEDKNFQDFQRRLTGYEKILDAQG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IRHGEKE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]