Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736152

Identifier: 187736152

GI number: 187736152

Start: 2010972

End: 2011913

Strand: Reverse

Name: 187736152

Synonym: Amuc_1665

Alternate gene names: NA

Gene position: 2011913-2010972 (Counterclockwise)

Preceding gene: 187736155

Following gene: 187736150

Centisome position: 75.52

GC content: 42.04

Gene sequence:

>942_bases
ATGAACGACCGCTTAACTATTTCACTTTTTGAGCTTTTTGAAAAATTCCCCAATGAGGAATCAGCTAAAAAGTATTTAGA
GGAAAAGCGGTGGGGCGATAAGGTAGTTTGCCCGTTCTGCGGGAAAAGCGAAAAACAGTATAGAGTAAAGAGGAACGGGG
TTGAGGGGTATTTTGAATGCGGGGAGTGCGGGAAAGTTTATACTGTGAGGACTGGAACTATTTTTGAGAGAAGCCATGTT
CCACTTCATAAATGGATTTTTGCCTTCTATTTAGTAGTGACTTCCAGAAAGGGTATTAGCTCCATGCAACTTTCCAAGGA
AATTGGGGTTACGCAAAAAACGGCGTGGTTCATGCTTCAAAGGATTAGGGAAGCATGCAATTCCAACCATGATGACGATG
ACAATAACGGCTTTCTATCTGGAATTGTTGAAGCTGATGGGGTGTATATTGGAGGCAAGGAATCCAATAAGCACGAATCT
CAGAAATTGAAGGCTGGGCGCGGAATTGTTGGAAAGACAGCGGTTTTAGGAATGAGAGCCAGAGCAGGAAAGGTTTTAGC
AAGGGTTATTCCCGACACTTCAAGAGATACAGTTCACCAAGTTTTGAATAAGTATTTGAGCCGGGATTCCGTTCTGGTTA
CTGATGAACATGCTTCTTACAAAGAATCACAGTTCAATCATCAGGTGGTGAATCATAGTGCCAAGCAGTATGTTGACGGA
ATGGCCCATACTAACGGCATCGAGAGCGTATGGGCGGTTTTGAAGAGAGGATTCTATGGAATCTACCATTCATTCAGCAC
AAAACATTTACAGAGATATGTAGATGAATTTGCGTATCGGTTGAATGAGGGAAATGTGAAAATCCACACATGGGTAAGAT
TGGATTCTCTTATGGCTAAAGCATTTTCGACGAGAATTACTTACGCCGAATTGAAGAATTGA

Upstream 100 bases:

>100_bases
CCAGAACGGAAATCGTATTGGAGCCTTTTTTCAAAGGGCCTTATATACTTGACTTCGGTTTCTCCGTATGCTATTAATTA
GCCATACTAAGGAGGCACCC

Downstream 100 bases:

>100_bases
CCGCCACCTTGCGAGCAAGGCGACGGCCTAAGTCATGCAAATCAAAGAATCGCCCCCTTCCCCGAAAGGAAGGAGGCCAG
TTAATTCACCGCCGAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNDRLTISLFELFEKFPNEESAKKYLEEKRWGDKVVCPFCGKSEKQYRVKRNGVEGYFECGECGKVYTVRTGTIFERSHV
PLHKWIFAFYLVVTSRKGISSMQLSKEIGVTQKTAWFMLQRIREACNSNHDDDDNNGFLSGIVEADGVYIGGKESNKHES
QKLKAGRGIVGKTAVLGMRARAGKVLARVIPDTSRDTVHQVLNKYLSRDSVLVTDEHASYKESQFNHQVVNHSAKQYVDG
MAHTNGIESVWAVLKRGFYGIYHSFSTKHLQRYVDEFAYRLNEGNVKIHTWVRLDSLMAKAFSTRITYAELKN

Sequences:

>Translated_313_residues
MNDRLTISLFELFEKFPNEESAKKYLEEKRWGDKVVCPFCGKSEKQYRVKRNGVEGYFECGECGKVYTVRTGTIFERSHV
PLHKWIFAFYLVVTSRKGISSMQLSKEIGVTQKTAWFMLQRIREACNSNHDDDDNNGFLSGIVEADGVYIGGKESNKHES
QKLKAGRGIVGKTAVLGMRARAGKVLARVIPDTSRDTVHQVLNKYLSRDSVLVTDEHASYKESQFNHQVVNHSAKQYVDG
MAHTNGIESVWAVLKRGFYGIYHSFSTKHLQRYVDEFAYRLNEGNVKIHTWVRLDSLMAKAFSTRITYAELKN
>Mature_313_residues
MNDRLTISLFELFEKFPNEESAKKYLEEKRWGDKVVCPFCGKSEKQYRVKRNGVEGYFECGECGKVYTVRTGTIFERSHV
PLHKWIFAFYLVVTSRKGISSMQLSKEIGVTQKTAWFMLQRIREACNSNHDDDDNNGFLSGIVEADGVYIGGKESNKHES
QKLKAGRGIVGKTAVLGMRARAGKVLARVIPDTSRDTVHQVLNKYLSRDSVLVTDEHASYKESQFNHQVVNHSAKQYVDG
MAHTNGIESVWAVLKRGFYGIYHSFSTKHLQRYVDEFAYRLNEGNVKIHTWVRLDSLMAKAFSTRITYAELKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003220 [H]

Pfam domain/function: PF03811 Ins_element1 [H]

EC number: NA

Molecular weight: Translated: 35813; Mature: 35813

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRLTISLFELFEKFPNEESAKKYLEEKRWGDKVVCPFCGKSEKQYRVKRNGVEGYFEC
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCEEEC
GECGKVYTVRTGTIFERSHVPLHKWIFAFYLVVTSRKGISSMQLSKEIGVTQKTAWFMLQ
CCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
RIREACNSNHDDDDNNGFLSGIVEADGVYIGGKESNKHESQKLKAGRGIVGKTAVLGMRA
HHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
RAGKVLARVIPDTSRDTVHQVLNKYLSRDSVLVTDEHASYKESQFNHQVVNHSAKQYVDG
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
MAHTNGIESVWAVLKRGFYGIYHSFSTKHLQRYVDEFAYRLNEGNVKIHTWVRLDSLMAK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AFSTRITYAELKN
HHHHHHHHHHHCC
>Mature Secondary Structure
MNDRLTISLFELFEKFPNEESAKKYLEEKRWGDKVVCPFCGKSEKQYRVKRNGVEGYFEC
CCCCEEEHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCEEEC
GECGKVYTVRTGTIFERSHVPLHKWIFAFYLVVTSRKGISSMQLSKEIGVTQKTAWFMLQ
CCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
RIREACNSNHDDDDNNGFLSGIVEADGVYIGGKESNKHESQKLKAGRGIVGKTAVLGMRA
HHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
RAGKVLARVIPDTSRDTVHQVLNKYLSRDSVLVTDEHASYKESQFNHQVVNHSAKQYVDG
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
MAHTNGIESVWAVLKRGFYGIYHSFSTKHLQRYVDEFAYRLNEGNVKIHTWVRLDSLMAK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AFSTRITYAELKN
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6306577; 9847077; 11016950 [H]