Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736145

Identifier: 187736145

GI number: 187736145

Start: 2002974

End: 2004176

Strand: Direct

Name: 187736145

Synonym: Amuc_1657

Alternate gene names: NA

Gene position: 2002974-2004176 (Clockwise)

Preceding gene: 187736143

Following gene: 187736146

Centisome position: 75.18

GC content: 60.76

Gene sequence:

>1203_bases
ATGTCCGCCTTTATCATCAGCCTGCCGGCCCTGGAACGCAACGCTCTTATCCTGAGGGATGTGGCGGATGCCGCAGGGTG
CCGCATCGCTCTGGCGCTGAAGGGGTTTTCCTGCTGGCCCTGTTTTGAGGCCCTGTCCCCCTGGCTGGACGGCTGCTGCG
CTTCCGGCCTGTGGGAGGCGCGGCTGGCCCGGCGCAGGTTCGGGAAGCATGTGCTGACTTATTCTCCCGGCCATGCCCCG
GAGGAAATAGCGGAGCTGGCGGAGATTTCCAGCCATCTTGATTTTAACAGCCTGACGCAGTGGAGCCGTTTCCGGGAGGA
AGTGATGCGGCATCCCCGCTTTGTTTCCGGTGAATTGAAATGCGGCTTGCGCGTCAATCCCCAATGTTCCACCGGGCATA
CGCCCATATATGACCCCTGTGCCCCCGGTTCCCGCCTGGGCGTGACGCCGGACATGATGCAGGGGGCGGACCTGTCCGGC
ATTTCCGGTCTTCATTTCCATACTTTATGCGAACAGGGAGCGGATGACCTGGCGGTAACGATGGAGGCGGTGGAACGCCA
CTTCGGCCATCTTCTGAGCCGCCCGGAGATTTCCTGGCTGAATATGGGAGGAGGTCATTGGATTACCAAACCCGACTATG
ACCGGAAGCTGCTGGCGGCACTTATCCGCCGCATCCGCGAACGCTACGGTGTGGAGGTATGGCTGGAACCGGGAGAGGCC
GCTGCCATTCATACCGGGGTGCTGCGGTGCCGGGTGCTGGACCTTTTTTCCGCGGAGGGGGTGAATCATGCCATTCTGGA
TGTTTCCGCATCCGCCCACATGCCGGATACGCTGGAAATGCCTTATCGGCCGGATGTGTTCCAGATTGCAGGAGACGCTT
CCCTCCGTTCCGCGCAGCAGCCCGCCGTACGGTTGGAAGGGGAGAGCTATGCGCTGGCGGGGAAGGCCGGGGAAAAAGCT
TATACGTACCGGCTGGGCGCCCCCACGTGCCTGGCGGGAGACCGGCTTGGAGATTATTCCTTCGCGGAGCCCCTGGCGGT
AGGTGACGAACTTGTGTTTGACGATATGGCGCATTATACGATGGTGAAGACTACGTTTTTCAATGGCGTGCGCCATCCGG
ACATCGCCGTTCAGAGAAAAGACGGTTCCGTGGAGACGGTGCGCCGTTTTTCCTATGAAGATTTTGAGGCCCGCCTGGGC
TAG

Upstream 100 bases:

>100_bases
AGTGGGGAAGGCGTTCTCATGCCCGTCTCGCAGGTATGATGGTAAATTACTAAAATTTTTCTCGCAAATCGTTCTGAATC
GCTTAGGTTGTCGTTGCTTT

Downstream 100 bases:

>100_bases
AATATTTGACCAGACAGATTGACATGGCAGCAGCTAAAGAAGGCATCAAGCAGAAAGTCCGCGGGTGGAGTCACCATGAT
TCCGCAGATTTGTACGGCAT

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSAFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARLARRRFGKHVLTYSPGHAP
EEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELKCGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSG
ISGLHFHTLCEQGADDLAVTMEAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEA
AAIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQPAVRLEGESYALAGKAGEKA
YTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYTMVKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARLG

Sequences:

>Translated_400_residues
MSAFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARLARRRFGKHVLTYSPGHAP
EEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELKCGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSG
ISGLHFHTLCEQGADDLAVTMEAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEA
AAIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQPAVRLEGESYALAGKAGEKA
YTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYTMVKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARLG
>Mature_399_residues
SAFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARLARRRFGKHVLTYSPGHAPE
EIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELKCGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGI
SGLHFHTLCEQGADDLAVTMEAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEAA
AIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQPAVRLEGESYALAGKAGEKAY
TYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYTMVKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARLG

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44193; Mature: 44062

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEA
CCEEEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHH
RLARRRFGKHVLTYSPGHAPEEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELK
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEE
CGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGISGLHFHTLCEQGADDLAVT
ECEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH
MEAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEA
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC
AAIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQ
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHCCC
PAVRLEGESYALAGKAGEKAYTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYT
CCEEECCCCEEEECCCCCCEEEEECCCCCEECCCCCCCCCCCCCHHCCCHHHHHHHHHHH
MVKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARLG
HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SAFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEA
CEEEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHH
RLARRRFGKHVLTYSPGHAPEEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELK
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCEE
CGLRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGISGLHFHTLCEQGADDLAVT
ECEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH
MEAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEA
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC
AAIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQ
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHCCC
PAVRLEGESYALAGKAGEKAYTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYT
CCEEECCCCEEEECCCCCCEEEEECCCCCEECCCCCCCCCCCCCHHCCCHHHHHHHHHHH
MVKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARLG
HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA