Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736077
Identifier: 187736077
GI number: 187736077
Start: 1910534
End: 1911043
Strand: Reverse
Name: 187736077
Synonym: Amuc_1588
Alternate gene names: NA
Gene position: 1911043-1910534 (Counterclockwise)
Preceding gene: 187736078
Following gene: 187736076
Centisome position: 71.73
GC content: 54.9
Gene sequence:
>510_bases ATGAATACCCCCGTTCTCAACGACAACCTGCGCGCCGCCACGGAAGCCCTTTGCAATCTGCTCGCCAAGGAAGACAAGGT TGTGGCCTCCAAGGCAAAAATAGGTCTCTTTTTCCAAAATCCGGAAGCAACCAAGCTTTTTGAAGAAGTAAACGCTTACG GAGAAGAACTGCGCAACAAGCACCTGGCGGGAATGCCTCCTACCGAAGAGGAAATTTCCAAATTCGACGCCCTGCGTGAA AACGTCATCAAGAATGATGCGGCCCGCGGCTTTTTGGAAGCCCGCCAGACCATTGACGAACTCCTGAACACCATCAATCA TTATCTGGGCATGTCCATTGACCTTGGCCGCGCTCCCACTCCTGAAGAAATAGAGGAAGCCCGCCAGCGCGCCATGAGCG CCCAGTCCTCCTGCTCCTGCGGCGGCCAGTGCGACAAGGAAAATTGCGATTGCGACGGCAAGTGTGACCACGACCATAAG GACGGCGGTTGCGGCTGCGGCAACCATTAA
Upstream 100 bases:
>100_bases CCGGATTTCCCACCTGCAGCAAACCTGCGGCAAGGAAATGCGTGCCATGCCTCGCAACCGGATTGCCCTGCACGAAAAGG CATGATTAAATAAATCTCAT
Downstream 100 bases:
>100_bases GACAATCTTTCAACTTTTGCCAAACGGCTTCACTCAAAAAGTGAAGCCGTTTTTTCTTCCCGAAAACAAACGATACTGTC CAGCGCGCCTGCAATTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNTPVLNDNLRAATEALCNLLAKEDKVVASKAKIGLFFQNPEATKLFEEVNAYGEELRNKHLAGMPPTEEEISKFDALRE NVIKNDAARGFLEARQTIDELLNTINHYLGMSIDLGRAPTPEEIEEARQRAMSAQSSCSCGGQCDKENCDCDGKCDHDHK DGGCGCGNH
Sequences:
>Translated_169_residues MNTPVLNDNLRAATEALCNLLAKEDKVVASKAKIGLFFQNPEATKLFEEVNAYGEELRNKHLAGMPPTEEEISKFDALRE NVIKNDAARGFLEARQTIDELLNTINHYLGMSIDLGRAPTPEEIEEARQRAMSAQSSCSCGGQCDKENCDCDGKCDHDHK DGGCGCGNH >Mature_169_residues MNTPVLNDNLRAATEALCNLLAKEDKVVASKAKIGLFFQNPEATKLFEEVNAYGEELRNKHLAGMPPTEEEISKFDALRE NVIKNDAARGFLEARQTIDELLNTINHYLGMSIDLGRAPTPEEIEEARQRAMSAQSSCSCGGQCDKENCDCDGKCDHDHK DGGCGCGNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18543; Mature: 18543
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPVLNDNLRAATEALCNLLAKEDKVVASKAKIGLFFQNPEATKLFEEVNAYGEELRNK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHC HLAGMPPTEEEISKFDALRENVIKNDAARGFLEARQTIDELLNTINHYLGMSIDLGRAPT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PEEIEEARQRAMSAQSSCSCGGQCDKENCDCDGKCDHDHKDGGCGCGNH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTPVLNDNLRAATEALCNLLAKEDKVVASKAKIGLFFQNPEATKLFEEVNAYGEELRNK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHC HLAGMPPTEEEISKFDALRENVIKNDAARGFLEARQTIDELLNTINHYLGMSIDLGRAPT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PEEIEEARQRAMSAQSSCSCGGQCDKENCDCDGKCDHDHKDGGCGCGNH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA