Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736068
Identifier: 187736068
GI number: 187736068
Start: 1900237
End: 1901097
Strand: Direct
Name: 187736068
Synonym: Amuc_1579
Alternate gene names: NA
Gene position: 1900237-1901097 (Clockwise)
Preceding gene: 187736064
Following gene: 187736069
Centisome position: 71.33
GC content: 59.12
Gene sequence:
>861_bases ATGAACCGCTGGCTTTGGCACGGGAAATTGAAGCGGCTTGACTTGTCTGTGTTGGGGAAGGAAAGTATCTGCATGCATGG AAAAACGGCAGGTTGTGTCCTGATGCTTGCGTGTTGCGTGCCCGTCTGGGTTCAGGCGGCGCCGGATACGGGGGAAGTGA AGGCAAAAATTGCGCGGAAAATCTGGCAAAACGAATGTGCCGGGACAATAAGGGGGCTGGTTTCCTGGAACCGGGGAGAG GCGTTTCCATCCCTGGGAATCGGACATTTCATCTGGTTTCCTGCCGGAGTCACGGAAAGGTTTGAGGAAAGTTTCCCTGC TTTCATTCAGTTCTGCCGCAGGAAGGGAATCCGGGTTCCGGAATGGTTTTCCGGAGCGGCTCCGTGGCGGACCAGAAAGG AATTTGAAACGGCGGACGTTCGCGGCGGTCTTCCTGAACGGATGCGCCGGTGGTTGTCCAGCCCGGCGGCCCTGCAAATG CAGGCGGATTTCATTATTGCCAGGTCTGTGGCCGCTCTGGAGCGTATCAAGGGCCAGTCCCGCCGTCCGGAAGAGATGGC GGCCCGCTATTACGCCGTGGCGTCGGTTCCCAACGGCATGTATGCCCTGATTGACTACGTGAATTTCAAGGGAGAAGGAA CCAATCCGGCGGAACAGTACCGGGGGATTGGCTGGGGGCTCAGGCAGGTGCTGGAGGAAATGCGCCCCGTTTCTCCCGGA CAGCCTGCGGCGGTTGAATTTGCGGAAGCGGCCAAAAGGGTGCTTCAGCGCCGCGTGGACAACAGCCCGCCGGGCCGCGG AGAAGCGCGCTGGCTTGCCGGATGGCGGAACCGGTGCGATTCCTATAAGAGGAATTTGTGA
Upstream 100 bases:
>100_bases CAGCCAGTGTCCGGTGGTGGGGAGCCTCCTTCGTAAATTGGGAGAGAATACCGTAAGGTTTATTGAACGCCAGAATCATG CCGTGCACGGCAAGGGTAGC
Downstream 100 bases:
>100_bases CGAATTCCTTTCCCAACAGAAAAGACCAGTTGTGCAATTATCCTTGACCTGACGGGGATTAGGGTGTAATTCCCTCACTC CATCCTGAAACTTCGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNRWLWHGKLKRLDLSVLGKESICMHGKTAGCVLMLACCVPVWVQAAPDTGEVKAKIARKIWQNECAGTIRGLVSWNRGE AFPSLGIGHFIWFPAGVTERFEESFPAFIQFCRRKGIRVPEWFSGAAPWRTRKEFETADVRGGLPERMRRWLSSPAALQM QADFIIARSVAALERIKGQSRRPEEMAARYYAVASVPNGMYALIDYVNFKGEGTNPAEQYRGIGWGLRQVLEEMRPVSPG QPAAVEFAEAAKRVLQRRVDNSPPGRGEARWLAGWRNRCDSYKRNL
Sequences:
>Translated_286_residues MNRWLWHGKLKRLDLSVLGKESICMHGKTAGCVLMLACCVPVWVQAAPDTGEVKAKIARKIWQNECAGTIRGLVSWNRGE AFPSLGIGHFIWFPAGVTERFEESFPAFIQFCRRKGIRVPEWFSGAAPWRTRKEFETADVRGGLPERMRRWLSSPAALQM QADFIIARSVAALERIKGQSRRPEEMAARYYAVASVPNGMYALIDYVNFKGEGTNPAEQYRGIGWGLRQVLEEMRPVSPG QPAAVEFAEAAKRVLQRRVDNSPPGRGEARWLAGWRNRCDSYKRNL >Mature_286_residues MNRWLWHGKLKRLDLSVLGKESICMHGKTAGCVLMLACCVPVWVQAAPDTGEVKAKIARKIWQNECAGTIRGLVSWNRGE AFPSLGIGHFIWFPAGVTERFEESFPAFIQFCRRKGIRVPEWFSGAAPWRTRKEFETADVRGGLPERMRRWLSSPAALQM QADFIIARSVAALERIKGQSRRPEEMAARYYAVASVPNGMYALIDYVNFKGEGTNPAEQYRGIGWGLRQVLEEMRPVSPG QPAAVEFAEAAKRVLQRRVDNSPPGRGEARWLAGWRNRCDSYKRNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32355; Mature: 32355
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRWLWHGKLKRLDLSVLGKESICMHGKTAGCVLMLACCVPVWVQAAPDTGEVKAKIARK CCCCCCCCHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IWQNECAGTIRGLVSWNRGEAFPSLGIGHFIWFPAGVTERFEESFPAFIQFCRRKGIRVP HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EWFSGAAPWRTRKEFETADVRGGLPERMRRWLSSPAALQMQADFIIARSVAALERIKGQS CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCC RRPEEMAARYYAVASVPNGMYALIDYVNFKGEGTNPAEQYRGIGWGLRQVLEEMRPVSPG CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC QPAAVEFAEAAKRVLQRRVDNSPPGRGEARWLAGWRNRCDSYKRNL CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRWLWHGKLKRLDLSVLGKESICMHGKTAGCVLMLACCVPVWVQAAPDTGEVKAKIARK CCCCCCCCHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IWQNECAGTIRGLVSWNRGEAFPSLGIGHFIWFPAGVTERFEESFPAFIQFCRRKGIRVP HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC EWFSGAAPWRTRKEFETADVRGGLPERMRRWLSSPAALQMQADFIIARSVAALERIKGQS CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCC RRPEEMAARYYAVASVPNGMYALIDYVNFKGEGTNPAEQYRGIGWGLRQVLEEMRPVSPG CCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCC QPAAVEFAEAAKRVLQRRVDNSPPGRGEARWLAGWRNRCDSYKRNL CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA