Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736000
Identifier: 187736000
GI number: 187736000
Start: 1801428
End: 1802618
Strand: Reverse
Name: 187736000
Synonym: Amuc_1510
Alternate gene names: NA
Gene position: 1802618-1801428 (Counterclockwise)
Preceding gene: 187736006
Following gene: 187735999
Centisome position: 67.66
GC content: 54.66
Gene sequence:
>1191_bases ATGTTCCTGTACAACCGTTCGAGCATCCTGGACAAGTATGTGGCGCGCACCTGGTTCACGGCCTTCATCATGTGTACGGC CATCCTGACGCTGATTTACATTATCGGAGATTTTGCGGACAATGTGGGAGACCTGATGAACCTGGACGCACCCCTCATGG GCACGTTCCGCTTTTACCTGAGCCAGCTGCCCATGATCCTGAACCTGATTCTGCCTTATACCCTTCTCCTGGGAACACTC TGGGCGCTTACCAAACTTTCCTCATCCTCAGAAATCACCGGCATGCTGCAGTCCGGACGGTCCCTGCTCCGAATCAACAC CCCCATCATCATCGGTGCCGTCTTTGCCTCCATCTACTTCGGCATCTTCGGGTTCCACTGGGCACCCAACTCCGCCCTGT ACAGGAAACTGATGTTCTCCTCCCTGAGCCAGAACAAAAATAACCATGCTTCCCAGAGCACCATCTACAAAAATGATGCG GAATCCCGCATCTGGTATCTGGGCAATCCTCCCGGAATTGATTCCCCCGGCAATCCTTTCCGGCAGGTGCGGGTGGAACA GTTCAGCGCCCCCGGAAAGATGAAATACGAGCTGTTTGCCGATGAAGCCACCTGGGATCCGGCCTCCAGGACATGGACCT TCCGGCAGGCCATCAAAAGAAATTATTCCCAGGAGGAACCCCGCCAGCTCCATGATGTTCCCGTTTTTGCCGGACAGGAA TACCAAACGCTGAAAGAGCATTATCCCGAAACACCCTGGCAACTGATTTCACCCAACGTCCGCGTGGATACACAGGGAAC CCCGGCTCTCCAGGAACTCATCAAGTCCGGCACGACAAATGCCAGGTACCTCAGAAGCCTGCAGACGGAATGGCACGTCA GGATCGCCCGCATATTTTCCTGCATTATCCTGACATTTATTGCCATCCCCTCCGCCATCACGTTCCAGAGGCGCTCCGCC ATGTCCGGCATCGGCATTGCGTTGTTCCTAGCGGCAGCCATGCTGTTCCTGTATGAGTTTTTCCCCACCCTGGCCTCCGC AGGCTACCTCCCCACCTGGCTGGGAGCATGGATGCCCAACATTATCTACACCATCATCGCCATCCGCCTTTTTCAAACCA AGCTGGCTCACAGAAGCTTCTCGGAATTATTGAGAGGCTTGAAAAAGACTCCCGTCCATGACCATTCCTGA
Upstream 100 bases:
>100_bases GATGCAATGGGAAATTCCCGGTACGCCGTCCGAATATCCCCTTTCCCAGCTCCTGCGGCCCTGGCTCATCCTTCTGGGCT GCTTTCTCCCCGCGCTGGGA
Downstream 100 bases:
>100_bases TCACTTTGCCGATTCCCGGGAAGCCGTTCTGAAAGCGCGTGAACTGCTCCGGCGGGCACACGCCGTCATTTTTGATTTTG ACGGATTGCTGGTGGATACG
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease YjgP/YjgQ; Permease YjgP/YjgQ Family
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFLYNRSSILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYLSQLPMILNLILPYTLLLGTL WALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHWAPNSALYRKLMFSSLSQNKNNHASQSTIYKNDA ESRIWYLGNPPGIDSPGNPFRQVRVEQFSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQE YQTLKEHYPETPWQLISPNVRVDTQGTPALQELIKSGTTNARYLRSLQTEWHVRIARIFSCIILTFIAIPSAITFQRRSA MSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIYTIIAIRLFQTKLAHRSFSELLRGLKKTPVHDHS
Sequences:
>Translated_396_residues MFLYNRSSILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYLSQLPMILNLILPYTLLLGTL WALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHWAPNSALYRKLMFSSLSQNKNNHASQSTIYKNDA ESRIWYLGNPPGIDSPGNPFRQVRVEQFSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQE YQTLKEHYPETPWQLISPNVRVDTQGTPALQELIKSGTTNARYLRSLQTEWHVRIARIFSCIILTFIAIPSAITFQRRSA MSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIYTIIAIRLFQTKLAHRSFSELLRGLKKTPVHDHS >Mature_396_residues MFLYNRSSILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYLSQLPMILNLILPYTLLLGTL WALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYFGIFGFHWAPNSALYRKLMFSSLSQNKNNHASQSTIYKNDA ESRIWYLGNPPGIDSPGNPFRQVRVEQFSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQE YQTLKEHYPETPWQLISPNVRVDTQGTPALQELIKSGTTNARYLRSLQTEWHVRIARIFSCIILTFIAIPSAITFQRRSA MSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPNIIYTIIAIRLFQTKLAHRSFSELLRGLKKTPVHDHS
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45086; Mature: 45086
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYNRSSILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SQLPMILNLILPYTLLLGTLWALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH GIFGFHWAPNSALYRKLMFSSLSQNKNNHASQSTIYKNDAESRIWYLGNPPGIDSPGNPF HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHH RQVRVEQFSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQE HHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCH YQTLKEHYPETPWQLISPNVRVDTQGTPALQELIKSGTTNARYLRSLQTEWHVRIARIFS HHHHHHHCCCCCHHHCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CIILTFIAIPSAITFQRRSAMSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIYTIIAIRLFQTKLAHRSFSELLRGLKKTPVHDHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLYNRSSILDKYVARTWFTAFIMCTAILTLIYIIGDFADNVGDLMNLDAPLMGTFRFYL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SQLPMILNLILPYTLLLGTLWALTKLSSSSEITGMLQSGRSLLRINTPIIIGAVFASIYF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH GIFGFHWAPNSALYRKLMFSSLSQNKNNHASQSTIYKNDAESRIWYLGNPPGIDSPGNPF HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHH RQVRVEQFSAPGKMKYELFADEATWDPASRTWTFRQAIKRNYSQEEPRQLHDVPVFAGQE HHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCH YQTLKEHYPETPWQLISPNVRVDTQGTPALQELIKSGTTNARYLRSLQTEWHVRIARIFS HHHHHHHCCCCCHHHCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH CIILTFIAIPSAITFQRRSAMSGIGIALFLAAAMLFLYEFFPTLASAGYLPTWLGAWMPN HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIYTIIAIRLFQTKLAHRSFSELLRGLKKTPVHDHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA