Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is prs [H]
Identifier: 187735962
GI number: 187735962
Start: 1762416
End: 1763345
Strand: Direct
Name: prs [H]
Synonym: Amuc_1471
Alternate gene names: 187735962
Gene position: 1762416-1763345 (Clockwise)
Preceding gene: 187735959
Following gene: 187735963
Centisome position: 66.15
GC content: 57.2
Gene sequence:
>930_bases ATGAAGATTATCAGCGGTACAGCACACAGAGAACTTGCGGAGCGCATTGCGCAAAGCGTAGGCATTCAGTTGACGAACGT CACGGTGAATACTTTCCCCGATGGGGAAAGTTTTGTAAAGATAAATGAAAACATCCGGGGCAAGGATGTTTTCCTCATTC AGCCCACCTGCCCTCCCACGAACCATAATATTATGGAATTGTGCGTGATGGTGGACGCCGCCCGCCGCGCCAGTGCCGGA CGCATCACGGCTGTTGTTCCTTTCTTCGGGTATGCCCGCCAGGATCGCAAGGACCAGCCCCGCGTTCCCATTACCGCCAA GTTGGTGGCCAATCTGCTGACGGCCGCCGGAGTGGACCGCGTGCTGACTATGGATCTCCATGCCGCCCAGATCCAGGGAT TCTTTGATATTCCGGTGGATCACCTGTACGCCGCCCCCGTTTTAATCCGTCACCTGCGCGAACATTATGTTAAAGACCTC AAGAAACTGGTCGTCGTCTCCCCGGACGTGGGCGGCGTGAAAATGGCTCGCGCGTATTCCGACGCGCTGGGTGCGGAATT GGCCATTGTTGCCAAGCACCGCGTCAACGCCACCCATGTGGAAGCCATGAATGTCATTGGTGACGTGGAAGGGCGCGATG CCGTTCTGATTGACGACATGACGGAAACCGCCGGCACCCTGTGCGCTGCCGCCAATATCCTGAAGGAACGGGGAGCCCAG CGCGTGTTCGCCTGCGTTTCTCACGGCGTGCTGGGGGACATGGCCCGCGAACGGATTTCCGGTTCCTGCATTGAACGCGT TCTTACCTCCGACACCGTTCCCATGGCCTATGGCCCCAAAGTGGACTGTGTCAGCGTGGGAGACCTGCTGGGCCATGCCG TGCAGCGCATACATGACGGAGAATCCGTATCATCATTATTTGACATTTAG
Upstream 100 bases:
>100_bases AACGGGGGAATCCATCATGGAGAAAAATCAAATTGTGAGAATTAAGTATTGCGATTATGCGGGCCTGTGTTCAGAATGCG TCCGCTTTTCAGTTTCCGGT
Downstream 100 bases:
>100_bases ACAATTTTAGTGCAGAGTCCTGCGCCCTGACCTGAGTACCGGTTTACGCGGGTTCGGAAATCCCGGCGGGGCCTCTGCCT GAACCCGATTAGGAAACATC
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKIISGTAHRELAERIAQSVGIQLTNVTVNTFPDGESFVKINENIRGKDVFLIQPTCPPTNHNIMELCVMVDAARRASAG RITAVVPFFGYARQDRKDQPRVPITAKLVANLLTAAGVDRVLTMDLHAAQIQGFFDIPVDHLYAAPVLIRHLREHYVKDL KKLVVVSPDVGGVKMARAYSDALGAELAIVAKHRVNATHVEAMNVIGDVEGRDAVLIDDMTETAGTLCAAANILKERGAQ RVFACVSHGVLGDMARERISGSCIERVLTSDTVPMAYGPKVDCVSVGDLLGHAVQRIHDGESVSSLFDI
Sequences:
>Translated_309_residues MKIISGTAHRELAERIAQSVGIQLTNVTVNTFPDGESFVKINENIRGKDVFLIQPTCPPTNHNIMELCVMVDAARRASAG RITAVVPFFGYARQDRKDQPRVPITAKLVANLLTAAGVDRVLTMDLHAAQIQGFFDIPVDHLYAAPVLIRHLREHYVKDL KKLVVVSPDVGGVKMARAYSDALGAELAIVAKHRVNATHVEAMNVIGDVEGRDAVLIDDMTETAGTLCAAANILKERGAQ RVFACVSHGVLGDMARERISGSCIERVLTSDTVPMAYGPKVDCVSVGDLLGHAVQRIHDGESVSSLFDI >Mature_309_residues MKIISGTAHRELAERIAQSVGIQLTNVTVNTFPDGESFVKINENIRGKDVFLIQPTCPPTNHNIMELCVMVDAARRASAG RITAVVPFFGYARQDRKDQPRVPITAKLVANLLTAAGVDRVLTMDLHAAQIQGFFDIPVDHLYAAPVLIRHLREHYVKDL KKLVVVSPDVGGVKMARAYSDALGAELAIVAKHRVNATHVEAMNVIGDVEGRDAVLIDDMTETAGTLCAAANILKERGAQ RVFACVSHGVLGDMARERISGSCIERVLTSDTVPMAYGPKVDCVSVGDLLGHAVQRIHDGESVSSLFDI
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=45.016077170418, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI4506129, Length=309, Percent_Identity=44.6601941747573, Blast_Score=296, Evalue=1e-80, Organism=Homo sapiens, GI28557709, Length=311, Percent_Identity=44.3729903536978, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI84875539, Length=312, Percent_Identity=44.2307692307692, Blast_Score=291, Evalue=5e-79, Organism=Homo sapiens, GI4506133, Length=338, Percent_Identity=34.6153846153846, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI194018537, Length=337, Percent_Identity=34.4213649851632, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI310128524, Length=147, Percent_Identity=31.2925170068027, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI310115209, Length=147, Percent_Identity=31.2925170068027, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI310118259, Length=147, Percent_Identity=31.2925170068027, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI310119946, Length=147, Percent_Identity=31.2925170068027, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1787458, Length=314, Percent_Identity=50.9554140127389, Blast_Score=313, Evalue=8e-87, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=43.0868167202572, Blast_Score=288, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17554702, Length=311, Percent_Identity=43.0868167202572, Blast_Score=287, Evalue=5e-78, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=43.042071197411, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71989924, Length=311, Percent_Identity=43.0868167202572, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=30.7692307692308, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321776, Length=312, Percent_Identity=43.9102564102564, Blast_Score=271, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6319403, Length=310, Percent_Identity=43.8709677419355, Blast_Score=267, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=310, Percent_Identity=44.1935483870968, Blast_Score=263, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6322667, Length=203, Percent_Identity=41.871921182266, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6324511, Length=87, Percent_Identity=50.5747126436782, Blast_Score=92, Evalue=9e-20, Organism=Drosophila melanogaster, GI21355239, Length=311, Percent_Identity=45.9807073954984, Blast_Score=298, Evalue=4e-81, Organism=Drosophila melanogaster, GI45551540, Length=334, Percent_Identity=42.814371257485, Blast_Score=285, Evalue=2e-77, Organism=Drosophila melanogaster, GI24651458, Length=352, Percent_Identity=30.9659090909091, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24651456, Length=352, Percent_Identity=30.9659090909091, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI281362873, Length=352, Percent_Identity=30.9659090909091, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24651454, Length=352, Percent_Identity=30.9659090909091, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24651462, Length=371, Percent_Identity=29.6495956873315, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24651464, Length=371, Percent_Identity=29.6495956873315, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI45552010, Length=371, Percent_Identity=29.6495956873315, Blast_Score=179, Evalue=2e-45,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33424; Mature: 33424
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIISGTAHRELAERIAQSVGIQLTNVTVNTFPDGESFVKINENIRGKDVFLIQPTCPPT CCCCCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCC NHNIMELCVMVDAARRASAGRITAVVPFFGYARQDRKDQPRVPITAKLVANLLTAAGVDR CCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC VLTMDLHAAQIQGFFDIPVDHLYAAPVLIRHLREHYVKDLKKLVVVSPDVGGVKMARAYS EEEECHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH DALGAELAIVAKHRVNATHVEAMNVIGDVEGRDAVLIDDMTETAGTLCAAANILKERGAQ HHHCCEEEEEEHHCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCHH RVFACVSHGVLGDMARERISGSCIERVLTSDTVPMAYGPKVDCVSVGDLLGHAVQRIHDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCC ESVSSLFDI CHHHHHHCC >Mature Secondary Structure MKIISGTAHRELAERIAQSVGIQLTNVTVNTFPDGESFVKINENIRGKDVFLIQPTCPPT CCCCCCHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCC NHNIMELCVMVDAARRASAGRITAVVPFFGYARQDRKDQPRVPITAKLVANLLTAAGVDR CCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC VLTMDLHAAQIQGFFDIPVDHLYAAPVLIRHLREHYVKDLKKLVVVSPDVGGVKMARAYS EEEECHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH DALGAELAIVAKHRVNATHVEAMNVIGDVEGRDAVLIDDMTETAGTLCAAANILKERGAQ HHHCCEEEEEEHHCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCHH RVFACVSHGVLGDMARERISGSCIERVLTSDTVPMAYGPKVDCVSVGDLLGHAVQRIHDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCC ESVSSLFDI CHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA