Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735960
Identifier: 187735960
GI number: 187735960
Start: 1760646
End: 1761368
Strand: Reverse
Name: 187735960
Synonym: Amuc_1469
Alternate gene names: NA
Gene position: 1761368-1760646 (Counterclockwise)
Preceding gene: 187735961
Following gene: 187735958
Centisome position: 66.11
GC content: 54.63
Gene sequence:
>723_bases ATGAATATTAAAACGCTCAAAATTCTCATCATCCCTTTTCTGCTGTCCGTCATGCTCGGCGGCACTTACCTGATGCCACG CAGGGGGGAAGTGCAGGACTCCTCCATCAGCATGGATCTCCCCACAGGCATGAATCCGTACGGCTGGCACGGCACGCGCC GGCAGGAATCCGAACAGGAACGGGGCATCCTGGCCCCGGATACGGAATTTTCCAAAGCGGATTACGTGCAGGAACTCCCC ATCAGTCTGGATGCGACGGAAACCGTACCCGTTTTGTGCCGCGTTTCCATCGTGAAATCCGGTCATGATTTAAACAACTC CATCCACCGTCCGGAACGCTGCCTCCCGGCCCAGGGCCATTTTAACCTGACGGGGACCACGGTGGATGTTCCCGTGGAAG GCCGCGGAACCATCAGAATGACCAAGCTGAAATCCCAGCAGAACATCGCTCCGGACCATCCGCAACCTGTCATTCTGGAC AGTATGCATTATTACGTATTTATCGGCCACCGCCACATGACGGAAGACCACTTGATCCGCACCCTGATGGATATGAAAGA CAGGGTTCTGCACGGCATGGATCAACGCTGGTGCTATTTCCAAATTTCCACCACGTACGGGGACAAGATCAGAGTGCCGG AAGAGAAAGCCAGGGAACAGACGGAACGCCTTATCAGCCAACTTCTTTCCCAACTGGTGAAGTGGGATGAACTGAACCGG TAG
Upstream 100 bases:
>100_bases CCGTCCACTCCCTGCTGGCCGGGGAACTCATCTGGAAGCCGTCACAGCGCAAGAAGCTGGTTGTTAAGATGAACAAGTCC CATTAAGCGTTTCCGCCGCC
Downstream 100 bases:
>100_bases CACGGCTCCGGCAGTTCAGTCCGGAAGATTTCTTTCCAGCCAGGAGGCAGCGGCTTGAAAAAGGCTGCATGCTTCTTCCC CAGGCGGCTCATAAAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNIKTLKILIIPFLLSVMLGGTYLMPRRGEVQDSSISMDLPTGMNPYGWHGTRRQESEQERGILAPDTEFSKADYVQELP ISLDATETVPVLCRVSIVKSGHDLNNSIHRPERCLPAQGHFNLTGTTVDVPVEGRGTIRMTKLKSQQNIAPDHPQPVILD SMHYYVFIGHRHMTEDHLIRTLMDMKDRVLHGMDQRWCYFQISTTYGDKIRVPEEKAREQTERLISQLLSQLVKWDELNR
Sequences:
>Translated_240_residues MNIKTLKILIIPFLLSVMLGGTYLMPRRGEVQDSSISMDLPTGMNPYGWHGTRRQESEQERGILAPDTEFSKADYVQELP ISLDATETVPVLCRVSIVKSGHDLNNSIHRPERCLPAQGHFNLTGTTVDVPVEGRGTIRMTKLKSQQNIAPDHPQPVILD SMHYYVFIGHRHMTEDHLIRTLMDMKDRVLHGMDQRWCYFQISTTYGDKIRVPEEKAREQTERLISQLLSQLVKWDELNR >Mature_240_residues MNIKTLKILIIPFLLSVMLGGTYLMPRRGEVQDSSISMDLPTGMNPYGWHGTRRQESEQERGILAPDTEFSKADYVQELP ISLDATETVPVLCRVSIVKSGHDLNNSIHRPERCLPAQGHFNLTGTTVDVPVEGRGTIRMTKLKSQQNIAPDHPQPVILD SMHYYVFIGHRHMTEDHLIRTLMDMKDRVLHGMDQRWCYFQISTTYGDKIRVPEEKAREQTERLISQLLSQLVKWDELNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27593; Mature: 27593
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKTLKILIIPFLLSVMLGGTYLMPRRGEVQDSSISMDLPTGMNPYGWHGTRRQESEQE CCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH RGILAPDTEFSKADYVQELPISLDATETVPVLCRVSIVKSGHDLNNSIHRPERCLPAQGH CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHEEEEHHHCCCCCCCCCCCCHHCCCCCCC FNLTGTTVDVPVEGRGTIRMTKLKSQQNIAPDHPQPVILDSMHYYVFIGHRHMTEDHLIR EEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEECCCCCHHHHHH TLMDMKDRVLHGMDQRWCYFQISTTYGDKIRVPEEKAREQTERLISQLLSQLVKWDELNR HHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKTLKILIIPFLLSVMLGGTYLMPRRGEVQDSSISMDLPTGMNPYGWHGTRRQESEQE CCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH RGILAPDTEFSKADYVQELPISLDATETVPVLCRVSIVKSGHDLNNSIHRPERCLPAQGH CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHEEEEHHHCCCCCCCCCCCCHHCCCCCCC FNLTGTTVDVPVEGRGTIRMTKLKSQQNIAPDHPQPVILDSMHYYVFIGHRHMTEDHLIR EEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEEEEECCCCCHHHHHH TLMDMKDRVLHGMDQRWCYFQISTTYGDKIRVPEEKAREQTERLISQLLSQLVKWDELNR HHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA