Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735958
Identifier: 187735958
GI number: 187735958
Start: 1759300
End: 1759884
Strand: Reverse
Name: 187735958
Synonym: Amuc_1467
Alternate gene names: NA
Gene position: 1759884-1759300 (Counterclockwise)
Preceding gene: 187735960
Following gene: 187735957
Centisome position: 66.06
GC content: 60.85
Gene sequence:
>585_bases ATGCAAGTAATCATTCACCAATGGGCCTTCAACGGAAGCTTCGACCAGCTTGCCTCCCTGCCCCGCCAGGAACTCGTCAA CGACTGGTTCGGCTATGATGTGGAGCCAAGTGCGGAATTCGCCTTCGCCACGGACGGAGAATTCCTCTGGTTTCTGGCTT CCCGCAGCAAGGCAGCCACCATCCATCCGGAAGCCCGGCCCGGCCAGTTCCAGCCGGAGCTATGGCGGTACGACCTGGCG GAATGGTTCATGGCCGCGGGAGACGGCACCAATTACTGGGAATTCAACCTTGCGCCCAACGGCGCATGGTGGGCCTGCGC CTTTTCCGATACCCGCCGCGCCAATGAAGACATCCCCGCTCCGCTGGCCGTGGATACCAAGTGCATTCTGACGGACGAGG GATGGTGCGCCATGGCCCGGATTCCGCTGAACGAACTGCGCGGCGTGGACATCCGCGACTGCAAGCTGGCAGCCACGTTC ATCCTGGATACTCCGGACCAGATTTTCCTGACTACGGCGGACGACCTTTCCGGCAATCCGGATTTCCACCGCCCGGACTG CTTCTGCACCCCCATTCTCAAATAA
Upstream 100 bases:
>100_bases AAATGCATGACGGCCCCCATGATGGAGAAATCACGTCAATATCCAAGCCTGTAAGACGTTCTGGCTTGATAAAACCTGAA AACTGTCCAAATGTGGTGGT
Downstream 100 bases:
>100_bases TCCATGTCTTTGAAAGAAGACATTTCCCGCATTCTGGGGCCTGAAAAAGTTTCCGGAGCCCCGGATGTGCTGGCGACGCA CGCCGGGGACAAATGGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQVIIHQWAFNGSFDQLASLPRQELVNDWFGYDVEPSAEFAFATDGEFLWFLASRSKAATIHPEARPGQFQPELWRYDLA EWFMAAGDGTNYWEFNLAPNGAWWACAFSDTRRANEDIPAPLAVDTKCILTDEGWCAMARIPLNELRGVDIRDCKLAATF ILDTPDQIFLTTADDLSGNPDFHRPDCFCTPILK
Sequences:
>Translated_194_residues MQVIIHQWAFNGSFDQLASLPRQELVNDWFGYDVEPSAEFAFATDGEFLWFLASRSKAATIHPEARPGQFQPELWRYDLA EWFMAAGDGTNYWEFNLAPNGAWWACAFSDTRRANEDIPAPLAVDTKCILTDEGWCAMARIPLNELRGVDIRDCKLAATF ILDTPDQIFLTTADDLSGNPDFHRPDCFCTPILK >Mature_194_residues MQVIIHQWAFNGSFDQLASLPRQELVNDWFGYDVEPSAEFAFATDGEFLWFLASRSKAATIHPEARPGQFQPELWRYDLA EWFMAAGDGTNYWEFNLAPNGAWWACAFSDTRRANEDIPAPLAVDTKCILTDEGWCAMARIPLNELRGVDIRDCKLAATF ILDTPDQIFLTTADDLSGNPDFHRPDCFCTPILK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22003; Mature: 22003
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVIIHQWAFNGSFDQLASLPRQELVNDWFGYDVEPSAEFAFATDGEFLWFLASRSKAAT CEEEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCEEE IHPEARPGQFQPELWRYDLAEWFMAAGDGTNYWEFNLAPNGAWWACAFSDTRRANEDIPA ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC PLAVDTKCILTDEGWCAMARIPLNELRGVDIRDCKLAATFILDTPDQIFLTTADDLSGNP CEEECCEEEEECCCCEEEEECCHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCC DFHRPDCFCTPILK CCCCCCEEEECCCC >Mature Secondary Structure MQVIIHQWAFNGSFDQLASLPRQELVNDWFGYDVEPSAEFAFATDGEFLWFLASRSKAAT CEEEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCEEE IHPEARPGQFQPELWRYDLAEWFMAAGDGTNYWEFNLAPNGAWWACAFSDTRRANEDIPA ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC PLAVDTKCILTDEGWCAMARIPLNELRGVDIRDCKLAATFILDTPDQIFLTTADDLSGNP CEEECCEEEEECCCCEEEEECCHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCC DFHRPDCFCTPILK CCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA