Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735925
Identifier: 187735925
GI number: 187735925
Start: 1719707
End: 1720687
Strand: Direct
Name: 187735925
Synonym: Amuc_1434
Alternate gene names: NA
Gene position: 1719707-1720687 (Clockwise)
Preceding gene: 187735924
Following gene: 187735927
Centisome position: 64.55
GC content: 54.03
Gene sequence:
>981_bases ATGCTCCTTCGATTCTTATCGAGTCTCTTTTTTGCGTCCGGCATTGTTTTGACCGCTCAGGCGAATACCCAGCCTTATCC GGATTCCGATTCTTCTGATGGATACGATACCGGTTTTTATGCAGAGGCTTATTCCGGCGGCTACGACAGCGCTCCGGCTC CGGCGGGGGAATCCGCCTCCAAGCCTGTTTTCCCCACGCAGTCCTATTTTGAATTGCTTGGCCCCATGGATTCCAGAAAC GGGCGCGGAAGCGTGGATATCCAGAATTGGATGACGGATTTGAATTTGTGCAGGATGTCCAGCGGTTCCTGGAATTTTTC TTCTACGGCGGCCTTGCGTCTGAGCTGGTTTAATGGAAAAGGAGCGGATGAGATGGATGTGGACCGGCTGTACACGATTT GGCTGAATGTGAACGCCTCCTATGCCATCACGGGGAAGACGCGCCTGGTTTTCGGTGTGACGCCCCAGATTTCCACGGAT TTCGATACATGGACGAGCCATAATATTTTCTTGGGAGGCCATGTTCTTCTGGCAGGCCCCTTGAACGACCGGTTCAGCTA TGGAATCGGCATCGGCTGTTATCCGCAGCTTGGGGATTATCCTTTCCTGCCCCTTATCCAGTTTAAATGGGAAGCTTCCC GCAATTGGACGCTTCAGCTGGAAGGGGCCCGCCTTTCCTATATCAACAAGGTGAGCGATGGGTTGAAGTGGGGACCCTTC GTTTCCGTGGTGTCCGGCACATGGACGATTCACCATGACCGCCGCGTCCGCCAGTTTGCATGGATTTCCGGCGTCGCCGG CATAGGCGCCGATGTGGGGTTGGGTCACTGGGGCAGCGTGCGCCCCAGGCTGGTGGCGGATGTCGGTTTTTCCTTCGGGA ATTCCGGCACTATCAAGACAAGCAACGGAAGCCATGATTTGGAAAAATACCATTATGACCCCGGTTTTTATTTGCGTGCG GGGCTGCTATTTGAGTTTTGA
Upstream 100 bases:
>100_bases ATGATTATGGTTGCGGTTCTGTTTGGGAATGGAGGCGGTTAATTAGTCATTTGTATATCTTTTGATTGACCGCGTGCGCG CGTATGTATACTTTCCGGTC
Downstream 100 bases:
>100_bases CCGGCCAACAGGATTAGCGAATACATGACAAAGGCCTCCGGTGCGTTGAATGTGCCGGAGGCCTTTTACATATGGGGACG TTTGAAGCCGGGACGGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLLRFLSSLFFASGIVLTAQANTQPYPDSDSSDGYDTGFYAEAYSGGYDSAPAPAGESASKPVFPTQSYFELLGPMDSRN GRGSVDIQNWMTDLNLCRMSSGSWNFSSTAALRLSWFNGKGADEMDVDRLYTIWLNVNASYAITGKTRLVFGVTPQISTD FDTWTSHNIFLGGHVLLAGPLNDRFSYGIGIGCYPQLGDYPFLPLIQFKWEASRNWTLQLEGARLSYINKVSDGLKWGPF VSVVSGTWTIHHDRRVRQFAWISGVAGIGADVGLGHWGSVRPRLVADVGFSFGNSGTIKTSNGSHDLEKYHYDPGFYLRA GLLFEF
Sequences:
>Translated_326_residues MLLRFLSSLFFASGIVLTAQANTQPYPDSDSSDGYDTGFYAEAYSGGYDSAPAPAGESASKPVFPTQSYFELLGPMDSRN GRGSVDIQNWMTDLNLCRMSSGSWNFSSTAALRLSWFNGKGADEMDVDRLYTIWLNVNASYAITGKTRLVFGVTPQISTD FDTWTSHNIFLGGHVLLAGPLNDRFSYGIGIGCYPQLGDYPFLPLIQFKWEASRNWTLQLEGARLSYINKVSDGLKWGPF VSVVSGTWTIHHDRRVRQFAWISGVAGIGADVGLGHWGSVRPRLVADVGFSFGNSGTIKTSNGSHDLEKYHYDPGFYLRA GLLFEF >Mature_326_residues MLLRFLSSLFFASGIVLTAQANTQPYPDSDSSDGYDTGFYAEAYSGGYDSAPAPAGESASKPVFPTQSYFELLGPMDSRN GRGSVDIQNWMTDLNLCRMSSGSWNFSSTAALRLSWFNGKGADEMDVDRLYTIWLNVNASYAITGKTRLVFGVTPQISTD FDTWTSHNIFLGGHVLLAGPLNDRFSYGIGIGCYPQLGDYPFLPLIQFKWEASRNWTLQLEGARLSYINKVSDGLKWGPF VSVVSGTWTIHHDRRVRQFAWISGVAGIGADVGLGHWGSVRPRLVADVGFSFGNSGTIKTSNGSHDLEKYHYDPGFYLRA GLLFEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35940; Mature: 35940
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRFLSSLFFASGIVLTAQANTQPYPDSDSSDGYDTGFYAEAYSGGYDSAPAPAGESAS CHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC KPVFPTQSYFELLGPMDSRNGRGSVDIQNWMTDLNLCRMSSGSWNFSSTAALRLSWFNGK CCCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHEEECCCCCCCCCEEEEEEEEECCC GADEMDVDRLYTIWLNVNASYAITGKTRLVFGVTPQISTDFDTWTSHNIFLGGHVLLAGP CCCCCCCCEEEEEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECC LNDRFSYGIGIGCYPQLGDYPFLPLIQFKWEASRNWTLQLEGARLSYINKVSDGLKWGPF CCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHHHCCCCCCCE VSVVSGTWTIHHDRRVRQFAWISGVAGIGADVGLGHWGSVRPRLVADVGFSFGNSGTIKT EEEEECEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE SNGSHDLEKYHYDPGFYLRAGLLFEF CCCCCCHHHEECCCCEEEEEEEEECC >Mature Secondary Structure MLLRFLSSLFFASGIVLTAQANTQPYPDSDSSDGYDTGFYAEAYSGGYDSAPAPAGESAS CHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC KPVFPTQSYFELLGPMDSRNGRGSVDIQNWMTDLNLCRMSSGSWNFSSTAALRLSWFNGK CCCCCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHEEECCCCCCCCCEEEEEEEEECCC GADEMDVDRLYTIWLNVNASYAITGKTRLVFGVTPQISTDFDTWTSHNIFLGGHVLLAGP CCCCCCCCEEEEEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEECC LNDRFSYGIGIGCYPQLGDYPFLPLIQFKWEASRNWTLQLEGARLSYINKVSDGLKWGPF CCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHHHCCCCCCCE VSVVSGTWTIHHDRRVRQFAWISGVAGIGADVGLGHWGSVRPRLVADVGFSFGNSGTIKT EEEEECEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE SNGSHDLEKYHYDPGFYLRAGLLFEF CCCCCCHHHEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA