Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735907
Identifier: 187735907
GI number: 187735907
Start: 1694000
End: 1694533
Strand: Direct
Name: 187735907
Synonym: Amuc_1415
Alternate gene names: NA
Gene position: 1694000-1694533 (Clockwise)
Preceding gene: 187735906
Following gene: 187735908
Centisome position: 63.59
GC content: 59.74
Gene sequence:
>534_bases ATGATATACCGTTTTAAGAAAACATTCATCGGCGTGGGAGGGCGTGAATATATCAGCAACCCCAAATTGAGTTTCCCTGA ACATGTCAAAATCCGCCGCCGCGGAACGAATCCCAGGTCCGGCCAGCCTTACACGGAGGCGGGTAGCGCATTTGTGGAGA CATCCGCCGTCGCGGCACGGCTCTGCTGCAGTGCTTCCGCCGCGCGCCAGTATCTGCACCGCCACGGTGTCCGTTTCCGG GTGGTCCGCAAGGGTACGGGCCCCCTGGCCCTGTACTGGCGGCGGCTGGATGTGGAGCGGGTTCTTGCTGGAAGGGAGCC CGTGCGCCGCCGCGTGCCTCCGTGTTATATGGATATGGCCGGGGCTGTCAGCATGCTGGGAGTAGTGCGCAGCTATGTTT ACAGGCTGGTGAAAAAAGGGCTGCTGCGTGAATACAGGTGCAGGATGAAAACAGCCCGTGGACTGCGCGTGCGCTGCTTT TACCACCGGGAGGATCTGGAACATGTCAGGCTGCACGTGCTCCAGAAAAGATGA
Upstream 100 bases:
>100_bases CTTAAACTCAATGCATTTTTGGAATCTCCAAAATATGTTAGAGTTTCGTGCGGAACGGCTGCATGAGGCTTCGTAAATCC AATGTGAAAACCCGTTAATC
Downstream 100 bases:
>100_bases CGGAAGCGGTTCCGGAGGATGCGTTTTTAGCTTGCGCGCGGGCCGGATTGTGTCACGTTAAGGGTATGATAGCTTTTCTG CGCGGCACGGTGGCGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MIYRFKKTFIGVGGREYISNPKLSFPEHVKIRRRGTNPRSGQPYTEAGSAFVETSAVAARLCCSASAARQYLHRHGVRFR VVRKGTGPLALYWRRLDVERVLAGREPVRRRVPPCYMDMAGAVSMLGVVRSYVYRLVKKGLLREYRCRMKTARGLRVRCF YHREDLEHVRLHVLQKR
Sequences:
>Translated_177_residues MIYRFKKTFIGVGGREYISNPKLSFPEHVKIRRRGTNPRSGQPYTEAGSAFVETSAVAARLCCSASAARQYLHRHGVRFR VVRKGTGPLALYWRRLDVERVLAGREPVRRRVPPCYMDMAGAVSMLGVVRSYVYRLVKKGLLREYRCRMKTARGLRVRCF YHREDLEHVRLHVLQKR >Mature_177_residues MIYRFKKTFIGVGGREYISNPKLSFPEHVKIRRRGTNPRSGQPYTEAGSAFVETSAVAARLCCSASAARQYLHRHGVRFR VVRKGTGPLALYWRRLDVERVLAGREPVRRRVPPCYMDMAGAVSMLGVVRSYVYRLVKKGLLREYRCRMKTARGLRVRCF YHREDLEHVRLHVLQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20597; Mature: 20597
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYRFKKTFIGVGGREYISNPKLSFPEHVKIRRRGTNPRSGQPYTEAGSAFVETSAVAAR CCEEEEHHHHCCCCHHHHCCCCCCCCHHHHHEECCCCCCCCCCCHHHCHHHHHHHHHHHH LCCSASAARQYLHRHGVRFRVVRKGTGPLALYWRRLDVERVLAGREPVRRRVPPCYMDMA HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHH GAVSMLGVVRSYVYRLVKKGLLREYRCRMKTARGLRVRCFYHREDLEHVRLHVLQKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCC >Mature Secondary Structure MIYRFKKTFIGVGGREYISNPKLSFPEHVKIRRRGTNPRSGQPYTEAGSAFVETSAVAAR CCEEEEHHHHCCCCHHHHCCCCCCCCHHHHHEECCCCCCCCCCCHHHCHHHHHHHHHHHH LCCSASAARQYLHRHGVRFRVVRKGTGPLALYWRRLDVERVLAGREPVRRRVPPCYMDMA HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHH GAVSMLGVVRSYVYRLVKKGLLREYRCRMKTARGLRVRCFYHREDLEHVRLHVLQKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA