Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fabG [H]
Identifier: 187735882
GI number: 187735882
Start: 1659074
End: 1659724
Strand: Direct
Name: fabG [H]
Synonym: Amuc_1389
Alternate gene names: 187735882
Gene position: 1659074-1659724 (Clockwise)
Preceding gene: 187735881
Following gene: 187735883
Centisome position: 62.28
GC content: 61.44
Gene sequence:
>651_bases ATGCGGAGAGTGTTCATCAGCGGCGGTCACGGCGGTTTGGCGCGGGCCATCGTGGAATGTTTTTCCGCTGCGGGATGGGA GACGGATGCCCCGAGCCATGCCGTACTGGATGTGGGAGACCGTTCCGCCGTACGCCGCTGGTTTGATTGCCATGCCGCGT ATGATTTGGCGGTTTGCGCCGCCGGAATTACCAGGGACAGGCCGTTCCTGAAGCAGACGGAGGAGGAGTGGGACGAGGTA ATGAATGTGAATGTGACGGGAGCCGCCTGGTGCGGCCGATGCGCCGCCGCCGCCATGGTGCGGGAGAAGAGGGAGGGGCA GGTGGTGATGATCGGTTCTTATGCGGCGCTCCGTCCGGCTTCGTCCCAGGCGGCTTATGCCGCTTCCAAGGCTGCTCTGG CGGGCCTGGTGAAAAGCCTGGCGCGGGAATGGGGAAAGGATGGGATTCGCGTGAATCTGGTGTTGCCGGGGTTCATGCTG ACGGAGATGACGGCCGTGCTGCGGGATAGCGTGAAAGAGGCGGCTTTGTCCCGGCATGTTTTGAGCCGGTTGAATACGCC GGAACAGGCTGCGGCGTTTATCCTGTTTTTACAGGATGTTCTTACGGCGGCTTCCGGCCAGGTGTTCGATCTGGACAGCA GGATTGTTTAA
Upstream 100 bases:
>100_bases TCCCCAGGAGGAGGCTGTGGAACGGCTGGTGGATCTGATCAAGGAGTATGGGCGGTGGGTGGACCCCAAGTGAGGTTTTA ACGTTGAGGGAACTTTTTTG
Downstream 100 bases:
>100_bases TAATGGACAGCGGATTTATTATCCGCGTTCTCCTCTGTTGATGCTATATTTTCCAAAAAATCATTTTTTTAATAAAAATG ATTGCCTGCGATGGTGCTGA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV
Sequences:
>Translated_216_residues MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV >Mature_216_residues MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=142, Percent_Identity=37.3239436619718, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI40254992, Length=144, Percent_Identity=32.6388888888889, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI32483357, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI5031737, Length=149, Percent_Identity=33.5570469798658, Blast_Score=77, Evalue=8e-15, Organism=Homo sapiens, GI7705925, Length=215, Percent_Identity=28.3720930232558, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI33667109, Length=136, Percent_Identity=34.5588235294118, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI4504505, Length=168, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI126723750, Length=132, Percent_Identity=35.6060606060606, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=215, Percent_Identity=31.1627906976744, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1789208, Length=145, Percent_Identity=31.0344827586207, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1788459, Length=143, Percent_Identity=33.5664335664336, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082100, Length=123, Percent_Identity=32.520325203252, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367365, Length=215, Percent_Identity=29.7674418604651, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790717, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786812, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082160, Length=116, Percent_Identity=32.7586206896552, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555706, Length=231, Percent_Identity=29.004329004329, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI25147288, Length=149, Percent_Identity=32.8859060402685, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17568967, Length=202, Percent_Identity=32.1782178217822, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994600, Length=165, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560676, Length=147, Percent_Identity=31.2925170068027, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17561402, Length=134, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71994604, Length=149, Percent_Identity=33.5570469798658, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=157, Percent_Identity=33.7579617834395, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24639444, Length=176, Percent_Identity=37.5, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21355319, Length=126, Percent_Identity=34.1269841269841, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24643142, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI18859837, Length=151, Percent_Identity=27.8145695364238, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI23397609, Length=165, Percent_Identity=28.4848484848485, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17737361, Length=244, Percent_Identity=27.4590163934426, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 23284; Mature: 23284
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCA CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH AGITRDRPFLKQTEEEWDEVMNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPA HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC SSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFMLTEMTAVLRDSVKEAALSRHV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH LSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV HHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCA CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH AGITRDRPFLKQTEEEWDEVMNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPA HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC SSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFMLTEMTAVLRDSVKEAALSRHV CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH LSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV HHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]