Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735878
Identifier: 187735878
GI number: 187735878
Start: 1653094
End: 1653609
Strand: Reverse
Name: 187735878
Synonym: Amuc_1385
Alternate gene names: NA
Gene position: 1653609-1653094 (Counterclockwise)
Preceding gene: 187735884
Following gene: 187735875
Centisome position: 62.07
GC content: 52.52
Gene sequence:
>516_bases ATGAAAACAACGCCCCTGCTTCTCTTCATCCCCCTGCTCATGACGTCCGGAGCCCTGGCCGCCGGCCAGGACGATTTCAA TGTCCAGACAGCTTCTTCCCGCATGGTCAAACATGAAGACGGTTCCCGCAGCTACTTTGAAAAAACAGGGGACGGCAAAG GGATGAAAAAAACCACTTACAACATCCGCAATGTCCTCGTTTCCGTAACCCTGTACAAAAGAGGGCCTTTTGGAGAGCTG CGCTCCTGCCTGATCTTTGACGGGCAGAAAAACGAACTCTTTTTCGTGCGTTACGGCTACGACGGCAACGCCAACCTGAG AGAAGAGCAAATGTTCGATTCCCGCACCAAGGAACTCGTGCGCCGCTTCCTTTACACTTATGACGCCATGGGCAACCGCA GCAAGCCCGTATGCATCACGCTGGTCAAGAGCACCAAGGATATTGAAACGCACGCCGTGCCCACCGCCCCGGAAAAAGAC CCCTTTGCGGACGATTTTAAAAAGAAAAACAAATAA
Upstream 100 bases:
>100_bases CACCTCCAATACGTCTCTCCTTACAAGCCAGTTCATCTAATTACGTTCTTGTCAAAGCCACTATACATCACTTTAATAAG TCAGAAACTCTTTTTTCACC
Downstream 100 bases:
>100_bases GCTCCGGTCCTTCGGCACGATTCCCCCCCTTCCCTCCTTCTCCGTCTTTCCTCCGGACGCCAAATCTTTATCCCCCGTCC GGTCCGGCGCACGCTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD PFADDFKKKNK
Sequences:
>Translated_171_residues MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD PFADDFKKKNK >Mature_171_residues MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD PFADDFKKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19458; Mature: 19458
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTY CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHEECCCCCHHHHHHCCCCCCCCHHHH NIRNVLVSVTLYKRGPFGELRSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELV HHHHHEEEEEEECCCCHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH RRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKDPFADDFKKKNK HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTY CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHEECCCCCHHHHHHCCCCCCCCHHHH NIRNVLVSVTLYKRGPFGELRSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELV HHHHHEEEEEEECCCCHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH RRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKDPFADDFKKKNK HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA