Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735878

Identifier: 187735878

GI number: 187735878

Start: 1653094

End: 1653609

Strand: Reverse

Name: 187735878

Synonym: Amuc_1385

Alternate gene names: NA

Gene position: 1653609-1653094 (Counterclockwise)

Preceding gene: 187735884

Following gene: 187735875

Centisome position: 62.07

GC content: 52.52

Gene sequence:

>516_bases
ATGAAAACAACGCCCCTGCTTCTCTTCATCCCCCTGCTCATGACGTCCGGAGCCCTGGCCGCCGGCCAGGACGATTTCAA
TGTCCAGACAGCTTCTTCCCGCATGGTCAAACATGAAGACGGTTCCCGCAGCTACTTTGAAAAAACAGGGGACGGCAAAG
GGATGAAAAAAACCACTTACAACATCCGCAATGTCCTCGTTTCCGTAACCCTGTACAAAAGAGGGCCTTTTGGAGAGCTG
CGCTCCTGCCTGATCTTTGACGGGCAGAAAAACGAACTCTTTTTCGTGCGTTACGGCTACGACGGCAACGCCAACCTGAG
AGAAGAGCAAATGTTCGATTCCCGCACCAAGGAACTCGTGCGCCGCTTCCTTTACACTTATGACGCCATGGGCAACCGCA
GCAAGCCCGTATGCATCACGCTGGTCAAGAGCACCAAGGATATTGAAACGCACGCCGTGCCCACCGCCCCGGAAAAAGAC
CCCTTTGCGGACGATTTTAAAAAGAAAAACAAATAA

Upstream 100 bases:

>100_bases
CACCTCCAATACGTCTCTCCTTACAAGCCAGTTCATCTAATTACGTTCTTGTCAAAGCCACTATACATCACTTTAATAAG
TCAGAAACTCTTTTTTCACC

Downstream 100 bases:

>100_bases
GCTCCGGTCCTTCGGCACGATTCCCCCCCTTCCCTCCTTCTCCGTCTTTCCTCCGGACGCCAAATCTTTATCCCCCGTCC
GGTCCGGCGCACGCTCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL
RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD
PFADDFKKKNK

Sequences:

>Translated_171_residues
MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL
RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD
PFADDFKKKNK
>Mature_171_residues
MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTYNIRNVLVSVTLYKRGPFGEL
RSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELVRRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKD
PFADDFKKKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19458; Mature: 19458

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTY
CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHEECCCCCHHHHHHCCCCCCCCHHHH
NIRNVLVSVTLYKRGPFGELRSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELV
HHHHHEEEEEEECCCCHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
RRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKDPFADDFKKKNK
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MKTTPLLLFIPLLMTSGALAAGQDDFNVQTASSRMVKHEDGSRSYFEKTGDGKGMKKTTY
CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHEECCCCCHHHHHHCCCCCCCCHHHH
NIRNVLVSVTLYKRGPFGELRSCLIFDGQKNELFFVRYGYDGNANLREEQMFDSRTKELV
HHHHHEEEEEEECCCCHHHHCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
RRFLYTYDAMGNRSKPVCITLVKSTKDIETHAVPTAPEKDPFADDFKKKNK
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA