Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735869
Identifier: 187735869
GI number: 187735869
Start: 1640200
End: 1641009
Strand: Direct
Name: 187735869
Synonym: Amuc_1376
Alternate gene names: NA
Gene position: 1640200-1641009 (Clockwise)
Preceding gene: 187735868
Following gene: 187735870
Centisome position: 61.57
GC content: 52.59
Gene sequence:
>810_bases ATGCCTAATAGAATCATCAGGGAAGGGTTTCTGACATCCGACAAGGTCGATAAGCTGAGTTGGGTGGAAGAGTGCTTCTA TCATCGTCTTTTACTTGCTGTAGATGACTATGGACGGTATCACGCCGACCCTCCTCTACTGATCGGAAAGATAATGCCTC GCAAAATAGGCAATGTCAGTAACCAGGACATAGAAAAGTGGCTCACCGCTTGTGTGACCGCGGGTCTTGTAAGGGTGTAC GGTGTCGAAGGGAAGCGTTATCTGGAGGTCTTGCAGTTCGACCAAAGGACCAGGGCGAAGAAGAGTAAGTTTCCTGCCCC TGATGAAGAAAAAACTGACGCTTGTCAGTCAAATGACGGACATGTGTCAGACATATGTCAGTCACGTGACCGTCATCCGC TCGCCTATACGGAGACGGAGTCGAATACGAATACGTATACGAAATCGGAAACGGAGACGGAGACGGAGACGGAGACGAAG GAAGCTGCGCCTGACGGCTCGCTTGCGGCTCCTTCTCGTTCTTCACTTCCTCTTCCTTCCTCACCGGAAGAGGTGGAAGC CTACCTGAAAAACGAGGTAGCCAGATGCCGCTTGAAGCTGCTCCCCAGGGACGTTTCGGAATGCGCCCTGCAATACTGGG CGGACCGGGGCGGCTCCGGCTGGGTGGACAAGTTCTCCTGCCCCATTGCCGATTGGAAAGCCAATGCCCTGGGCTACGCC CTGCGCTGGGCAAGAAATCTTGATGCCAAAGGGCAACTACCCGGAGAGGAAAGCGACCCCTTCGATCCAAAATTTAGAAA AAATATTTAA
Upstream 100 bases:
>100_bases GCCGGGCTTTCTGATCTGCATCAAACACCAGGACGCCGGCACGGTGCTGGATTACGTCCGCAAGAGGTGTGATGAACTAC GTTTGATTGAACCATAGAAC
Downstream 100 bases:
>100_bases CCCTCAAAAAGAGAAACCATCATGCATTTTACAGAAACACAACTCAACGCCGAAAAGACCGTTCTTGGCAACTGCATTGA CGGCGCCGACAAGGTAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVY GVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETK EAAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA LRWARNLDAKGQLPGEESDPFDPKFRKNI
Sequences:
>Translated_269_residues MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVY GVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETK EAAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA LRWARNLDAKGQLPGEESDPFDPKFRKNI >Mature_268_residues PNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVYG VEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKE AAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYAL RWARNLDAKGQLPGEESDPFDPKFRKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30406; Mature: 30275
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVS CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC NQDIEKWLTACVTAGLVRVYGVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC HVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKEAAPDGSLAAPSRSSLPLPS HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC SPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH LRWARNLDAKGQLPGEESDPFDPKFRKNI HHHHHCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure PNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVS CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC NQDIEKWLTACVTAGLVRVYGVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC HVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKEAAPDGSLAAPSRSSLPLPS HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC SPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH LRWARNLDAKGQLPGEESDPFDPKFRKNI HHHHHCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA