Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735869

Identifier: 187735869

GI number: 187735869

Start: 1640200

End: 1641009

Strand: Direct

Name: 187735869

Synonym: Amuc_1376

Alternate gene names: NA

Gene position: 1640200-1641009 (Clockwise)

Preceding gene: 187735868

Following gene: 187735870

Centisome position: 61.57

GC content: 52.59

Gene sequence:

>810_bases
ATGCCTAATAGAATCATCAGGGAAGGGTTTCTGACATCCGACAAGGTCGATAAGCTGAGTTGGGTGGAAGAGTGCTTCTA
TCATCGTCTTTTACTTGCTGTAGATGACTATGGACGGTATCACGCCGACCCTCCTCTACTGATCGGAAAGATAATGCCTC
GCAAAATAGGCAATGTCAGTAACCAGGACATAGAAAAGTGGCTCACCGCTTGTGTGACCGCGGGTCTTGTAAGGGTGTAC
GGTGTCGAAGGGAAGCGTTATCTGGAGGTCTTGCAGTTCGACCAAAGGACCAGGGCGAAGAAGAGTAAGTTTCCTGCCCC
TGATGAAGAAAAAACTGACGCTTGTCAGTCAAATGACGGACATGTGTCAGACATATGTCAGTCACGTGACCGTCATCCGC
TCGCCTATACGGAGACGGAGTCGAATACGAATACGTATACGAAATCGGAAACGGAGACGGAGACGGAGACGGAGACGAAG
GAAGCTGCGCCTGACGGCTCGCTTGCGGCTCCTTCTCGTTCTTCACTTCCTCTTCCTTCCTCACCGGAAGAGGTGGAAGC
CTACCTGAAAAACGAGGTAGCCAGATGCCGCTTGAAGCTGCTCCCCAGGGACGTTTCGGAATGCGCCCTGCAATACTGGG
CGGACCGGGGCGGCTCCGGCTGGGTGGACAAGTTCTCCTGCCCCATTGCCGATTGGAAAGCCAATGCCCTGGGCTACGCC
CTGCGCTGGGCAAGAAATCTTGATGCCAAAGGGCAACTACCCGGAGAGGAAAGCGACCCCTTCGATCCAAAATTTAGAAA
AAATATTTAA

Upstream 100 bases:

>100_bases
GCCGGGCTTTCTGATCTGCATCAAACACCAGGACGCCGGCACGGTGCTGGATTACGTCCGCAAGAGGTGTGATGAACTAC
GTTTGATTGAACCATAGAAC

Downstream 100 bases:

>100_bases
CCCTCAAAAAGAGAAACCATCATGCATTTTACAGAAACACAACTCAACGCCGAAAAGACCGTTCTTGGCAACTGCATTGA
CGGCGCCGACAAGGTAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVY
GVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETK
EAAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA
LRWARNLDAKGQLPGEESDPFDPKFRKNI

Sequences:

>Translated_269_residues
MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVY
GVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETK
EAAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA
LRWARNLDAKGQLPGEESDPFDPKFRKNI
>Mature_268_residues
PNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVSNQDIEKWLTACVTAGLVRVYG
VEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDGHVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKE
AAPDGSLAAPSRSSLPLPSSPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYAL
RWARNLDAKGQLPGEESDPFDPKFRKNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30406; Mature: 30275

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVS
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
NQDIEKWLTACVTAGLVRVYGVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
HVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKEAAPDGSLAAPSRSSLPLPS
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
SPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH
LRWARNLDAKGQLPGEESDPFDPKFRKNI
HHHHHCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
PNRIIREGFLTSDKVDKLSWVEECFYHRLLLAVDDYGRYHADPPLLIGKIMPRKIGNVS
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
NQDIEKWLTACVTAGLVRVYGVEGKRYLEVLQFDQRTRAKKSKFPAPDEEKTDACQSNDG
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
HVSDICQSRDRHPLAYTETESNTNTYTKSETETETETETKEAAPDGSLAAPSRSSLPLPS
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
SPEEVEAYLKNEVARCRLKLLPRDVSECALQYWADRGGSGWVDKFSCPIADWKANALGYA
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH
LRWARNLDAKGQLPGEESDPFDPKFRKNI
HHHHHCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA