Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735854

Identifier: 187735854

GI number: 187735854

Start: 1632243

End: 1632686

Strand: Reverse

Name: 187735854

Synonym: Amuc_1361

Alternate gene names: NA

Gene position: 1632686-1632243 (Counterclockwise)

Preceding gene: 187735855

Following gene: 187735846

Centisome position: 61.28

GC content: 50.45

Gene sequence:

>444_bases
ATGAAAATGACTGAACAGGACATGAAGGCGCTTGCCGGGAAATACAGCCGTTTCATCCGGTGGAGCGATGAAGATAATTG
CTACATCGGTTCCCTGCCTGATTTTGAAAAGGACTGCACCCACGGGGAAACCCTGGAAGAAGTCAACCGCAACCTTCAGG
AAGTGGCGGAAATGTATATTGAACGTTATCTGGAAAAGGGAATGGAACTCCCCCAGCCCCGGTCCATAGCTATTTCTCCG
TCACCTTTCCGCGAAACAGGCAATGAAAAAAGCATTGCGCGGTTAAGGAAAAGCCAGGGAATGAGTCAGAAAGATTTTGC
CGCCGTGCTGGGAGTCAGTCCTTCCACGCTGGTCAAATGGGAACACGGCTTGCGGCGCCCCTGCGGCCCTTCCGCAAAAT
TGCTTGACCTTATTGAAAAGCATCCTGAATTGATCAATTCCTGA

Upstream 100 bases:

>100_bases
ACGATGCCAAGCCCTATCTGGTCAAGCACGTCAGGGAGAAGATAGAAGAGGCAAAAAGCAAGGGAGCGTAAGCTCCCTTG
CAACCCCAAGAAAAACAACT

Downstream 100 bases:

>100_bases
CGTTATTTTGCCCAGGCAACAAAAAAAGCCCCCTCAAATAGGGGGCGTGGATAGAAACAAATAACCCTAAACAAGCTCCT
GGGCCACGCTGAACGCATCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKMTEQDMKALAGKYSRFIRWSDEDNCYIGSLPDFEKDCTHGETLEEVNRNLQEVAEMYIERYLEKGMELPQPRSIAISP
SPFRETGNEKSIARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELINS

Sequences:

>Translated_147_residues
MKMTEQDMKALAGKYSRFIRWSDEDNCYIGSLPDFEKDCTHGETLEEVNRNLQEVAEMYIERYLEKGMELPQPRSIAISP
SPFRETGNEKSIARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELINS
>Mature_147_residues
MKMTEQDMKALAGKYSRFIRWSDEDNCYIGSLPDFEKDCTHGETLEEVNRNLQEVAEMYIERYLEKGMELPQPRSIAISP
SPFRETGNEKSIARLRKSQGMSQKDFAAVLGVSPSTLVKWEHGLRRPCGPSAKLLDLIEKHPELINS

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16773; Mature: 16773

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTEQDMKALAGKYSRFIRWSDEDNCYIGSLPDFEKDCTHGETLEEVNRNLQEVAEMYI
CCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH
ERYLEKGMELPQPRSIAISPSPFRETGNEKSIARLRKSQGMSQKDFAAVLGVSPSTLVKW
HHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
EHGLRRPCGPSAKLLDLIEKHPELINS
HHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMTEQDMKALAGKYSRFIRWSDEDNCYIGSLPDFEKDCTHGETLEEVNRNLQEVAEMYI
CCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHH
ERYLEKGMELPQPRSIAISPSPFRETGNEKSIARLRKSQGMSQKDFAAVLGVSPSTLVKW
HHHHHHCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
EHGLRRPCGPSAKLLDLIEKHPELINS
HHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA