Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735846
Identifier: 187735846
GI number: 187735846
Start: 1626018
End: 1626488
Strand: Reverse
Name: 187735846
Synonym: Amuc_1353
Alternate gene names: NA
Gene position: 1626488-1626018 (Counterclockwise)
Preceding gene: 187735854
Following gene: 187735823
Centisome position: 61.05
GC content: 54.56
Gene sequence:
>471_bases ATGGAACCGCAACAGTCATACTACACAGCACATACGGATTTTGAGTATCCGGAAGAAGGGCAGGAGCAGGAAAACGAATT TCGGGAACGCGCCCTTGAAATGATCCGGATCATGTCCCTGGCCCTGTATCACGTCATTAACAGCCGCACTCCCAATGTCA CCGCATTCGGCGTGGCATACGCTCTGGGGTTGACGTCTGTGCTCGGAAATGAACGCATGGCCCAGAGGGCGCGGAAACTG GGCGTGCATAAAGCGGCCATTTCCCGCGCTGCTTCCAAATTCCTTGCTGAGAGCGGACTCCCGCCCTCCCTGATGATGCA GCAGACGGAACATGCGGCCATGAAGCGCCGCCCTGTCAAAAAGCTGGAGGCACCGCGGAAAAAGACGCCGGAACAAATCA TGAAAGCATACGGCACGGGAAAGAAACGTTTTGAGGAAAACCAGATGATTCTGGATCTGTTCAAAGCCTGA
Upstream 100 bases:
>100_bases GCCCAATTGCCGGGCAAGTTCCGCCTGTGAAATCCCTGCCATTATTCCCTTCTTTACATATTATTATATCATGATATATT GATATGTAAATACACCAAGC
Downstream 100 bases:
>100_bases ATCCTTCCGGTTCACCCGGGTGAAGGATTTCCCACATGATACGGGCGCAAGCTTCCCGGATGGTACAGCCTGATTGCTGG ATGATCGGCTCATAAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MEPQQSYYTAHTDFEYPEEGQEQENEFRERALEMIRIMSLALYHVINSRTPNVTAFGVAYALGLTSVLGNERMAQRARKL GVHKAAISRAASKFLAESGLPPSLMMQQTEHAAMKRRPVKKLEAPRKKTPEQIMKAYGTGKKRFEENQMILDLFKA
Sequences:
>Translated_156_residues MEPQQSYYTAHTDFEYPEEGQEQENEFRERALEMIRIMSLALYHVINSRTPNVTAFGVAYALGLTSVLGNERMAQRARKL GVHKAAISRAASKFLAESGLPPSLMMQQTEHAAMKRRPVKKLEAPRKKTPEQIMKAYGTGKKRFEENQMILDLFKA >Mature_156_residues MEPQQSYYTAHTDFEYPEEGQEQENEFRERALEMIRIMSLALYHVINSRTPNVTAFGVAYALGLTSVLGNERMAQRARKL GVHKAAISRAASKFLAESGLPPSLMMQQTEHAAMKRRPVKKLEAPRKKTPEQIMKAYGTGKKRFEENQMILDLFKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17805; Mature: 17805
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPQQSYYTAHTDFEYPEEGQEQENEFRERALEMIRIMSLALYHVINSRTPNVTAFGVAY CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALGLTSVLGNERMAQRARKLGVHKAAISRAASKFLAESGLPPSLMMQQTEHAAMKRRPVK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH KLEAPRKKTPEQIMKAYGTGKKRFEENQMILDLFKA HHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPQQSYYTAHTDFEYPEEGQEQENEFRERALEMIRIMSLALYHVINSRTPNVTAFGVAY CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALGLTSVLGNERMAQRARKLGVHKAAISRAASKFLAESGLPPSLMMQQTEHAAMKRRPVK HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH KLEAPRKKTPEQIMKAYGTGKKRFEENQMILDLFKA HHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA