Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735806
Identifier: 187735806
GI number: 187735806
Start: 1592381
End: 1593007
Strand: Direct
Name: 187735806
Synonym: Amuc_1313
Alternate gene names: NA
Gene position: 1592381-1593007 (Clockwise)
Preceding gene: 187735805
Following gene: 187735815
Centisome position: 59.77
GC content: 50.24
Gene sequence:
>627_bases ATGACTGAGATGGAGCCGGACAGGAAAACTGCGGAACGGGCAATCAGGGAAGCGTATGAATCCAACCCGGGGGGCTGGGC GGAACATTCCCGCTATGTGGCGGAAGCCTGTAAAAATATAGCCTCGCGCTGTAAAGGGTTATCCGGTGAAAAAGCTTATG TCCTGGGGCTGTTGCATGATATTGGACGGTATGCCGGAGTAAGTTCCGAAAAGCATTTGATAGACGGGTACCGCTATTGT GCGGCAAGAGGCTGGAAAAAGGCGGCGCAGATTTGTATTTCCCATGCGTTTATGATACAGGATATCAATACTTCCATCGG CACGTTTGACGTGAGTGGGGAGGATTACCTGTTCATGAAAGATTTTGTAGAGAACGCGGTCTATGACGACTACGACCGCC TGGTCCAGTTATGTGACGCTTTGGCCATGCCGACAGGTTTCTGCCTTTTGGAAAAACGGTTTGTAGATGTGACAATCCGG TATGGAGTGCATCCGTTTACGGTGGACCGGTGGAAAAAAATTCTGCAGCTCAAGGCGTTCTTTGAGAAAAAAGCGGGCTG TTCCATTTATGAGCTTCTGCCGGGCGTCGTTGAAAACAGTTTTCGCCAGGAGGAAAGCCATGCGTGA
Upstream 100 bases:
>100_bases TAAAAAGGAATATTTTTGCGTTACATCATCTGAAGGCTGGGGGAGGGGTGTAGCGGAATCGTGATTTTTATTTCAGTGGT GATGCGCTATAGTGGCAGCC
Downstream 100 bases:
>100_bases TGAAGCGGAAGATTTTTTTGGAAACGGCACATCCCAATGCGCTAAGGCAAATCGCCCGGGAGGGGGAATTTCTGTGCCGG CCAGCTGCGTTGCTGTTGGG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Phosphohydrolase; Metal Dependent Phosphohydrolase; HD Domain Protein; Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTEMEPDRKTAERAIREAYESNPGGWAEHSRYVAEACKNIASRCKGLSGEKAYVLGLLHDIGRYAGVSSEKHLIDGYRYC AARGWKKAAQICISHAFMIQDINTSIGTFDVSGEDYLFMKDFVENAVYDDYDRLVQLCDALAMPTGFCLLEKRFVDVTIR YGVHPFTVDRWKKILQLKAFFEKKAGCSIYELLPGVVENSFRQEESHA
Sequences:
>Translated_208_residues MTEMEPDRKTAERAIREAYESNPGGWAEHSRYVAEACKNIASRCKGLSGEKAYVLGLLHDIGRYAGVSSEKHLIDGYRYC AARGWKKAAQICISHAFMIQDINTSIGTFDVSGEDYLFMKDFVENAVYDDYDRLVQLCDALAMPTGFCLLEKRFVDVTIR YGVHPFTVDRWKKILQLKAFFEKKAGCSIYELLPGVVENSFRQEESHA >Mature_207_residues TEMEPDRKTAERAIREAYESNPGGWAEHSRYVAEACKNIASRCKGLSGEKAYVLGLLHDIGRYAGVSSEKHLIDGYRYCA ARGWKKAAQICISHAFMIQDINTSIGTFDVSGEDYLFMKDFVENAVYDDYDRLVQLCDALAMPTGFCLLEKRFVDVTIRY GVHPFTVDRWKKILQLKAFFEKKAGCSIYELLPGVVENSFRQEESHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23631; Mature: 23500
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMEPDRKTAERAIREAYESNPGGWAEHSRYVAEACKNIASRCKGLSGEKAYVLGLLHD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IGRYAGVSSEKHLIDGYRYCAARGWKKAAQICISHAFMIQDINTSIGTFDVSGEDYLFMK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH DFVENAVYDDYDRLVQLCDALAMPTGFCLLEKRFVDVTIRYGVHPFTVDRWKKILQLKAF HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHH FEKKAGCSIYELLPGVVENSFRQEESHA HHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEMEPDRKTAERAIREAYESNPGGWAEHSRYVAEACKNIASRCKGLSGEKAYVLGLLHD CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IGRYAGVSSEKHLIDGYRYCAARGWKKAAQICISHAFMIQDINTSIGTFDVSGEDYLFMK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH DFVENAVYDDYDRLVQLCDALAMPTGFCLLEKRFVDVTIRYGVHPFTVDRWKKILQLKAF HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHH FEKKAGCSIYELLPGVVENSFRQEESHA HHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA