Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fklB [H]
Identifier: 187735776
GI number: 187735776
Start: 1544185
End: 1545018
Strand: Direct
Name: fklB [H]
Synonym: Amuc_1282
Alternate gene names: 187735776
Gene position: 1544185-1545018 (Clockwise)
Preceding gene: 187735775
Following gene: 187735777
Centisome position: 57.96
GC content: 55.28
Gene sequence:
>834_bases ATGAAGATGAAACCTTCCATCGCCCTGTTTGCCGCTTCCGCTCTTCTGGCGGGTGTGGCAGGCGCGCAAGAAAAGGCCGC CGAAGCTCCGGCAGCCGACCAACCCAAACAAGAGAAAGAAATTACTGTGTCTCCCGAACAGATGAAAAAGGACCTGGGCT ATTTTCTGGGTTTCCAGAGCGGTCAGCAACTTGGTTCCATTCCTACCCTGACCTTTGACGACCTGGACCAGGAATCCTTC CTGCAGGGCATCAAGGACGGCATGGTCCGCAAGCCCGCCAAGGACCAGGAACAGCTGAAACCCGCCCTGGATGCGTTCCA GAAGCAAATTGACGAACGCATTTCCGCCAAGGCCAAGGCCAATTTGGAGGCCAGCAGGAAATTCATGGAGGAAAACGGCA AAAAAGAAGGCGTCACCACAACGAAGTCCGGCCTCCAGTACAAGGTTGTGAACAAGGGCGGCGAAGAAAAATTTGATGAA AAGAAGTTCAAGAACCCCATGTTCAAGGTGAAGTACAAGGGCACGCTGCTGGACGGCACCGTGTTTGACGACACCAAGGG CAAGTCCGTGGAACTTCCTCTCCAGGTCATCCCCGGTTTTGCCGAAGCGCTGACCACGATGCCCGTCGGCTCCAAATGGA TTGTCTACATTCCTTCCGAGCTGGCTTACGGGGAAAACACTCCCGGCGCTCCGATTGAACCCAATTCCCCGCTCATCTTT GATCTGGAACTGGACGGCATTTCGGAAGCCCCTGCTCCCCAGGGAGGCCCCATGAGCATTTCTCCGGAACAACTTCAGGA GATGCTTAAGCAGAGCGGCGCCCAGCAGCAGTAA
Upstream 100 bases:
>100_bases TGCCGGGAGAGGATGACAGGATGACCGATTCTCTTGTCTTGTGATATGAACGGAATCCGTTAAAAAGGAGTCCTCTTTTC AAAGAAAGGATAAAAATACC
Downstream 100 bases:
>100_bases GGAAAAAATAATTCAAGTCAGGGCCGTTCCCGGGAGGGAGCGGCCTTTTTGTTTCTATCCGTACCGCTTTCATCAGGAAA GCGAATGGGCAGACTGGGAA
Product: peptidylprolyl isomerase FKBP-type
Products: NA
Alternate protein names: FKBP22; PPIase; Rotamase [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKMKPSIALFAASALLAGVAGAQEKAAEAPAADQPKQEKEITVSPEQMKKDLGYFLGFQSGQQLGSIPTLTFDDLDQESF LQGIKDGMVRKPAKDQEQLKPALDAFQKQIDERISAKAKANLEASRKFMEENGKKEGVTTTKSGLQYKVVNKGGEEKFDE KKFKNPMFKVKYKGTLLDGTVFDDTKGKSVELPLQVIPGFAEALTTMPVGSKWIVYIPSELAYGENTPGAPIEPNSPLIF DLELDGISEAPAPQGGPMSISPEQLQEMLKQSGAQQQ
Sequences:
>Translated_277_residues MKMKPSIALFAASALLAGVAGAQEKAAEAPAADQPKQEKEITVSPEQMKKDLGYFLGFQSGQQLGSIPTLTFDDLDQESF LQGIKDGMVRKPAKDQEQLKPALDAFQKQIDERISAKAKANLEASRKFMEENGKKEGVTTTKSGLQYKVVNKGGEEKFDE KKFKNPMFKVKYKGTLLDGTVFDDTKGKSVELPLQVIPGFAEALTTMPVGSKWIVYIPSELAYGENTPGAPIEPNSPLIF DLELDGISEAPAPQGGPMSISPEQLQEMLKQSGAQQQ >Mature_277_residues MKMKPSIALFAASALLAGVAGAQEKAAEAPAADQPKQEKEITVSPEQMKKDLGYFLGFQSGQQLGSIPTLTFDDLDQESF LQGIKDGMVRKPAKDQEQLKPALDAFQKQIDERISAKAKANLEASRKFMEENGKKEGVTTTKSGLQYKVVNKGGEEKFDE KKFKNPMFKVKYKGTLLDGTVFDDTKGKSVELPLQVIPGFAEALTTMPVGSKWIVYIPSELAYGENTPGAPIEPNSPLIF DLELDGISEAPAPQGGPMSISPEQLQEMLKQSGAQQQ
Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm. Periplasm. Note=According to PubMed:7610040 it is periplasmic [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Escherichia coli, GI87082390, Length=199, Percent_Identity=42.2110552763819, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789745, Length=192, Percent_Identity=35.4166666666667, Blast_Score=91, Evalue=7e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 - InterPro: IPR000774 [H]
Pfam domain/function: PF00254 FKBP_C; PF01346 FKBP_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 30115; Mature: 30115
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKPSIALFAASALLAGVAGAQEKAAEAPAADQPKQEKEITVSPEQMKKDLGYFLGFQS CCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCC GQQLGSIPTLTFDDLDQESFLQGIKDGMVRKPAKDQEQLKPALDAFQKQIDERISAKAKA CCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NLEASRKFMEENGKKEGVTTTKSGLQYKVVNKGGEEKFDEKKFKNPMFKVKYKGTLLDGT CHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCEEECCE VFDDTKGKSVELPLQVIPGFAEALTTMPVGSKWIVYIPSELAYGENTPGAPIEPNSPLIF EECCCCCCEEECHHHHHCCHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEEE DLELDGISEAPAPQGGPMSISPEQLQEMLKQSGAQQQ EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKMKPSIALFAASALLAGVAGAQEKAAEAPAADQPKQEKEITVSPEQMKKDLGYFLGFQS CCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCC GQQLGSIPTLTFDDLDQESFLQGIKDGMVRKPAKDQEQLKPALDAFQKQIDERISAKAKA CCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NLEASRKFMEENGKKEGVTTTKSGLQYKVVNKGGEEKFDEKKFKNPMFKVKYKGTLLDGT CHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCEEECCE VFDDTKGKSVELPLQVIPGFAEALTTMPVGSKWIVYIPSELAYGENTPGAPIEPNSPLIF EECCCCCCEEECHHHHHCCHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEEE DLELDGISEAPAPQGGPMSISPEQLQEMLKQSGAQQQ EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8703024; 9298646 [H]