Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735760
Identifier: 187735760
GI number: 187735760
Start: 1526791
End: 1527453
Strand: Reverse
Name: 187735760
Synonym: Amuc_1266
Alternate gene names: NA
Gene position: 1527453-1526791 (Counterclockwise)
Preceding gene: 187735761
Following gene: 187735759
Centisome position: 57.33
GC content: 55.81
Gene sequence:
>663_bases ATGGCCGCCACCGTAGCAATCGACCTAAATGGGGAGGCAGCCGAAGGGACATCTCTGCCTGCAAACCTTAAATTGTCTGG ATTCGGAGACGTCAACAGCGGAAGTGTCATCACTGCACAAAAAGTCGTCACATGGTTGCAAGGCACCACCGGCTGGCAAG GCACCACTGCAAACGGCAATTCCGGCTCCGGTATTTACGGCAGCGTCACCGCATCCGGGGATACTGATGTATCCGTGTCT TTCATCAACAGAAATGCTTACGGCGGCTCTATCGTAGGAACAGCGGTAACGCTTACCAGTGATTACGCCAGTTATACCGG ATTGACTCTTTCCGTGGACTGCGCCGGGCTGCAATCCGGAGCAAACTTCACGACGCTCAATATCGTTTATCAGACGGCAG AAGGCTGGCAGATCAGCCAGTTGACCGGTCAGGCCTCTTCCCTGATTCAAACAGGCATGACCCTGTCCGTGGACTTGAGC GGTACTCCCCTTACCAGCGACACGGCTTACATTGTGATGTCCACCCGCAATGGCGGCGGAAACACGAACTCCAACCTGCT TTTTTCCATGTCAGCCACTGCTGAGGATGTCGTTCCGGAACCGGCTACGGCGTCCCTGAGCCTTTTGGGCCTGTCCCTGC TGATGCTGCGCCGCAAGCGCTGA
Upstream 100 bases:
>100_bases AGACAGCCCGGCAAATTACAGCAATAAAAAAGAGCAACGAACAACCATGAAGAACACATTATTTCTTTCCGGTCTTATGG CTTTGTGTTGCGGCGCAGGG
Downstream 100 bases:
>100_bases AATAAAAAACGCGATCTTTCCCGTTTTTCAACAACTGTCCGGGGTGTAAAATCTCGGACAGTTTTTCATTTTTAAGCCTG AAGGCTTGCAATCGTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAATVAIDLNGEAAEGTSLPANLKLSGFGDVNSGSVITAQKVVTWLQGTTGWQGTTANGNSGSGIYGSVTASGDTDVSVS FINRNAYGGSIVGTAVTLTSDYASYTGLTLSVDCAGLQSGANFTTLNIVYQTAEGWQISQLTGQASSLIQTGMTLSVDLS GTPLTSDTAYIVMSTRNGGGNTNSNLLFSMSATAEDVVPEPATASLSLLGLSLLMLRRKR
Sequences:
>Translated_220_residues MAATVAIDLNGEAAEGTSLPANLKLSGFGDVNSGSVITAQKVVTWLQGTTGWQGTTANGNSGSGIYGSVTASGDTDVSVS FINRNAYGGSIVGTAVTLTSDYASYTGLTLSVDCAGLQSGANFTTLNIVYQTAEGWQISQLTGQASSLIQTGMTLSVDLS GTPLTSDTAYIVMSTRNGGGNTNSNLLFSMSATAEDVVPEPATASLSLLGLSLLMLRRKR >Mature_219_residues AATVAIDLNGEAAEGTSLPANLKLSGFGDVNSGSVITAQKVVTWLQGTTGWQGTTANGNSGSGIYGSVTASGDTDVSVSF INRNAYGGSIVGTAVTLTSDYASYTGLTLSVDCAGLQSGANFTTLNIVYQTAEGWQISQLTGQASSLIQTGMTLSVDLSG TPLTSDTAYIVMSTRNGGGNTNSNLLFSMSATAEDVVPEPATASLSLLGLSLLMLRRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22398; Mature: 22267
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS00673 V8_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATVAIDLNGEAAEGTSLPANLKLSGFGDVNSGSVITAQKVVTWLQGTTGWQGTTANGN CCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC SGSGIYGSVTASGDTDVSVSFINRNAYGGSIVGTAVTLTSDYASYTGLTLSVDCAGLQSG CCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEECCCHHHCCCEEEEEECCCCCC ANFTTLNIVYQTAEGWQISQLTGQASSLIQTGMTLSVDLSGTPLTSDTAYIVMSTRNGGG CCEEEEEEEEEECCCEEEEHHCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCC NTNSNLLFSMSATAEDVVPEPATASLSLLGLSLLMLRRKR CCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AATVAIDLNGEAAEGTSLPANLKLSGFGDVNSGSVITAQKVVTWLQGTTGWQGTTANGN CEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC SGSGIYGSVTASGDTDVSVSFINRNAYGGSIVGTAVTLTSDYASYTGLTLSVDCAGLQSG CCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEECCCHHHCCCEEEEEECCCCCC ANFTTLNIVYQTAEGWQISQLTGQASSLIQTGMTLSVDLSGTPLTSDTAYIVMSTRNGGG CCEEEEEEEEEECCCEEEEHHCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCC NTNSNLLFSMSATAEDVVPEPATASLSLLGLSLLMLRRKR CCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA