Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735734

Identifier: 187735734

GI number: 187735734

Start: 1487749

End: 1490136

Strand: Direct

Name: 187735734

Synonym: Amuc_1240

Alternate gene names: NA

Gene position: 1487749-1490136 (Clockwise)

Preceding gene: 187735733

Following gene: 187735735

Centisome position: 55.84

GC content: 54.94

Gene sequence:

>2388_bases
ATGTTTTCCGCCGCCCAGGAAAATATTCCGGATGCCGCTCCCATCGCGGATGGTCCGCTGGTCGCTAATCCGGAGCAGGA
TACGCTGGATATGGCGGACATGCTGTACAAGCAGGCCCAGGCTCCGGCTACGAAGGAGAACCGGCAGGAATATGGACGCC
TTCTTGATTTAAGCTTGCGTAAATATCTGGAATTTACCCAACGTTTTCCCCAGTCCGCCCAGGCTCCTCTGGCGGAGTAT
CGTGCTGCCATGTGTTTGGAGGAGCTGGGCAGGAAAGATGAGGCACATGGCCTGTTCCTCAGATTGATTCAGACGGGCAG
CCCCGCCCTGGTTGCCGCCTCCGCCTACCGTCTGGCGACGGATGCTTCTTCTGCCGGGGAGATAGATAAGGCCATCCAGT
ATTACCAGCTCGTGATTCGCAATGCGGAACAGAATGATTTGAAGGTGGACGCCCAGTACCGTCTGGGACGCCTGTTTCTT
TCCAGCGGTAATCCGGAGGCAGCCGCCACCATGTTTTGTGCGGTGATGGGCAATCCGGAAGCGGATGCCAAGTTTGTTCT
GGTGTCCCGGATGGGATATGCCGCCCTGTGTGCGGATACGGGACGCTTGGGAGAAGCTTATTCCGAATATCGCAAGGTGC
TGGAAACGCCCGGTGTGGATAACAGGAACAGGGGAATCGCCACTCTTCAGGCCGCCATGCTGGCCACCAAACTGAAAAAG
ACTGCGGAAGCCCAGGGCCTTTATGAACGGCTTTTGAAGGACGAGTCCCTGAAGGAGATGGCGCCGGAGGCCCGAATGGG
GCTTCTTCTGGGGCTGTACAATATGGGCAAGTACAGGGAGATACTTTCCCAGTATGAGCAGCAGAAGGGAATAAAGATGC
CGACAAAGGACGGCCAGGTGCGTCTGTTGATGCTGCTGGGGCAGTCCGCCTATAAATTGAAGGAGTACCGGAAAGCGGCA
GATTTCTTTCTGGAAGCGGAAAAGTCCGTTCCTTATACGCAGGAGGCCATGCAAGCCTCCTTTTACCGGTTATTGTGTTA
TAATGAACTTAAGCAGAAAGATCTCCCCCAGCGGGCCCAGAGCTTCCTGAACCATTATGCCAAGGCTTTTCCTACCAGTG
AGCTGCATGATATGGTGCGCCTGATGGCTGCAGAGAACCTGTTCAGCTCCAATCCGGCGGATGCCGCCCGGTTTTATGCC
AGCATTGATTTTGACAAAGTGCCCCCGAAGATGCGTGCGGATATTTTATATAAGAGCGCATGGGCGATTGCCCAGGCCGG
GAACAGAGGTGTGGCCGCCAAGCTGCTGACTGATTTTATCAATGATTTTCCGAAAGATCCCCGCATTTGCGAGGCATTGA
CGTTGCGTGGGGACATGTATGCCAAGACCAAGAAGGAAGCTGAGGCGCTGATGGATTTTGACCGTGTGATTGCCCGCTGG
CCGAAAGCTGAATCAGCTGCCGCCGCATGGCAGAGAGCCGCTCAGATTTATGCGGGACGCCAGGATATGGCGAACATGGC
GAAGTATTATGAAGGCCTGATTCAGAATTTTCCGAAGGCGTCTCCTGCCGCTTTGGCTGAAGCCCATTTCCTGCTGGGGC
GTGCGGCGTTTGACCAGGGAGATTTCAAGTCTTCTATCAGCCATATGGCTGAGGCCAAGACTCTGGATCCCCAGAAATAC
GGAGAACAGGTTAATGTGCTTTCCGTTCTGTCCTATCACAAGCTCCAGGACGTGAATAAACTGAAGGAGGCCCTGGAAAC
CCTGCAAAAGGAAAATCCTTCCGCCGTGGCTCGTGTGCCGGATGTCATCCCCGCATGGCTGGGCCTTCAGGCCTATGGGA
TGAAGGATCTGGAAACGGCGGACAAGTATATGACCTGGGCTACGCAGAACGACCAGCTTCAGAATGTGAAGAAGGTGATT
TGGCGTAATTTGGCGAAGGTGCGCCTGGCGCTCAGAAAGTATGACCGCGCCTTGGTGGCTTCCAACAATTTTCTGAAGGA
TGAGGACCAGCCTTACCGCCGTGCGGACGGCATGCTGGACAAGGCTTCCATTTTGCTGGGGCTGGGCAAGTATGCGGATG
CCAGGAAGACGGCGGAAGATGCGCTGGCTCTGGGCGTGGAAGGTCCTCTGATGGCTTCCTTGAAAATTGTTCTGGGGGAT
ATTTCCTATGCGGAGAAAAAGTTTGATGAAGCGGCCAAGCATTACGGTGTTACGGCCGAGCTGTTTGTCAATGACGCCGA
ACTGAAACCCAAGGCTCTCTTCAAGGCGGCGGAAGCTTTGGACAAGGCCGGGCGCAAATCGGAGGCTTCCCAATACCGGG
CCCGCCTGCAAAAGGAATTCCCGGATTGGAAACAGGATGGAGAGTCTTTGCCTCCGGACGCACGATAA

Upstream 100 bases:

>100_bases
TTTCCACGCGTCCTCCGGTTCCATCTTCAATCAATGTTTCCAATTCCCAGGCTTCATGAAAGCGTTTTTTTCCATTAATG
CAGGTTTAATAACTTTGGCG

Downstream 100 bases:

>100_bases
GCGTTTTAAAGATTGAAACCGGAAATGGAGAACAGGCGTAAAAGATGGTATGATCTGTTTGGATTGCTGCCTCGCAATCT
GGGCCGTCTGTTGCTGTGGT

Product: Tetratricopeptide TPR_2 repeat protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MFSAAQENIPDAAPIADGPLVANPEQDTLDMADMLYKQAQAPATKENRQEYGRLLDLSLRKYLEFTQRFPQSAQAPLAEY
RAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLATDASSAGEIDKAIQYYQLVIRNAEQNDLKVDAQYRLGRLFL
SSGNPEAAATMFCAVMGNPEADAKFVLVSRMGYAALCADTGRLGEAYSEYRKVLETPGVDNRNRGIATLQAAMLATKLKK
TAEAQGLYERLLKDESLKEMAPEARMGLLLGLYNMGKYREILSQYEQQKGIKMPTKDGQVRLLMLLGQSAYKLKEYRKAA
DFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQSFLNHYAKAFPTSELHDMVRLMAAENLFSSNPADAARFYA
SIDFDKVPPKMRADILYKSAWAIAQAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIARW
PKAESAAAAWQRAAQIYAGRQDMANMAKYYEGLIQNFPKASPAALAEAHFLLGRAAFDQGDFKSSISHMAEAKTLDPQKY
GEQVNVLSVLSYHKLQDVNKLKEALETLQKENPSAVARVPDVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVI
WRNLAKVRLALRKYDRALVASNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAEDALALGVEGPLMASLKIVLGD
ISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEALDKAGRKSEASQYRARLQKEFPDWKQDGESLPPDAR

Sequences:

>Translated_795_residues
MFSAAQENIPDAAPIADGPLVANPEQDTLDMADMLYKQAQAPATKENRQEYGRLLDLSLRKYLEFTQRFPQSAQAPLAEY
RAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLATDASSAGEIDKAIQYYQLVIRNAEQNDLKVDAQYRLGRLFL
SSGNPEAAATMFCAVMGNPEADAKFVLVSRMGYAALCADTGRLGEAYSEYRKVLETPGVDNRNRGIATLQAAMLATKLKK
TAEAQGLYERLLKDESLKEMAPEARMGLLLGLYNMGKYREILSQYEQQKGIKMPTKDGQVRLLMLLGQSAYKLKEYRKAA
DFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQSFLNHYAKAFPTSELHDMVRLMAAENLFSSNPADAARFYA
SIDFDKVPPKMRADILYKSAWAIAQAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIARW
PKAESAAAAWQRAAQIYAGRQDMANMAKYYEGLIQNFPKASPAALAEAHFLLGRAAFDQGDFKSSISHMAEAKTLDPQKY
GEQVNVLSVLSYHKLQDVNKLKEALETLQKENPSAVARVPDVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVI
WRNLAKVRLALRKYDRALVASNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAEDALALGVEGPLMASLKIVLGD
ISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEALDKAGRKSEASQYRARLQKEFPDWKQDGESLPPDAR
>Mature_795_residues
MFSAAQENIPDAAPIADGPLVANPEQDTLDMADMLYKQAQAPATKENRQEYGRLLDLSLRKYLEFTQRFPQSAQAPLAEY
RAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLATDASSAGEIDKAIQYYQLVIRNAEQNDLKVDAQYRLGRLFL
SSGNPEAAATMFCAVMGNPEADAKFVLVSRMGYAALCADTGRLGEAYSEYRKVLETPGVDNRNRGIATLQAAMLATKLKK
TAEAQGLYERLLKDESLKEMAPEARMGLLLGLYNMGKYREILSQYEQQKGIKMPTKDGQVRLLMLLGQSAYKLKEYRKAA
DFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQSFLNHYAKAFPTSELHDMVRLMAAENLFSSNPADAARFYA
SIDFDKVPPKMRADILYKSAWAIAQAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIARW
PKAESAAAAWQRAAQIYAGRQDMANMAKYYEGLIQNFPKASPAALAEAHFLLGRAAFDQGDFKSSISHMAEAKTLDPQKY
GEQVNVLSVLSYHKLQDVNKLKEALETLQKENPSAVARVPDVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVI
WRNLAKVRLALRKYDRALVASNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAEDALALGVEGPLMASLKIVLGD
ISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEALDKAGRKSEASQYRARLQKEFPDWKQDGESLPPDAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88789; Mature: 88789

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAAQENIPDAAPIADGPLVANPEQDTLDMADMLYKQAQAPATKENRQEYGRLLDLSLR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KYLEFTQRFPQSAQAPLAEYRAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLAT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHC
DASSAGEIDKAIQYYQLVIRNAEQNDLKVDAQYRLGRLFLSSGNPEAAATMFCAVMGNPE
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
ADAKFVLVSRMGYAALCADTGRLGEAYSEYRKVLETPGVDNRNRGIATLQAAMLATKLKK
CCCEEEEEHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
TAEAQGLYERLLKDESLKEMAPEARMGLLLGLYNMGKYREILSQYEQQKGIKMPTKDGQV
HHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCE
RLLMLLGQSAYKLKEYRKAADFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQ
EEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFLNHYAKAFPTSELHDMVRLMAAENLFSSNPADAARFYASIDFDKVPPKMRADILYKSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
WAIAQAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIARW
HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
PKAESAAAAWQRAAQIYAGRQDMANMAKYYEGLIQNFPKASPAALAEAHFLLGRAAFDQG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
DFKSSISHMAEAKTLDPQKYGEQVNVLSVLSYHKLQDVNKLKEALETLQKENPSAVARVP
HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVIWRNLAKVRLALRKYDRALVA
HHHHHHHCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAEDALALGVEGPLMASLKIVLGD
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEALDKAGRKSEASQYRARLQKEF
HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
PDWKQDGESLPPDAR
CCHHHCCCCCCCCCC
>Mature Secondary Structure
MFSAAQENIPDAAPIADGPLVANPEQDTLDMADMLYKQAQAPATKENRQEYGRLLDLSLR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KYLEFTQRFPQSAQAPLAEYRAAMCLEELGRKDEAHGLFLRLIQTGSPALVAASAYRLAT
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHC
DASSAGEIDKAIQYYQLVIRNAEQNDLKVDAQYRLGRLFLSSGNPEAAATMFCAVMGNPE
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
ADAKFVLVSRMGYAALCADTGRLGEAYSEYRKVLETPGVDNRNRGIATLQAAMLATKLKK
CCCEEEEEHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
TAEAQGLYERLLKDESLKEMAPEARMGLLLGLYNMGKYREILSQYEQQKGIKMPTKDGQV
HHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCE
RLLMLLGQSAYKLKEYRKAADFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQ
EEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFLNHYAKAFPTSELHDMVRLMAAENLFSSNPADAARFYASIDFDKVPPKMRADILYKSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
WAIAQAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIARW
HHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
PKAESAAAAWQRAAQIYAGRQDMANMAKYYEGLIQNFPKASPAALAEAHFLLGRAAFDQG
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
DFKSSISHMAEAKTLDPQKYGEQVNVLSVLSYHKLQDVNKLKEALETLQKENPSAVARVP
HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVIWRNLAKVRLALRKYDRALVA
HHHHHHHCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAEDALALGVEGPLMASLKIVLGD
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEALDKAGRKSEASQYRARLQKEF
HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
PDWKQDGESLPPDAR
CCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA