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The map label for this gene is infA [H]

Identifier: 187735727

GI number: 187735727

Start: 1482487

End: 1482681

Strand: Reverse

Name: infA [H]

Synonym: Amuc_1233

Alternate gene names: 187735727

Gene position: 1482681-1482487 (Counterclockwise)

Preceding gene: 187735730

Following gene: 187735726

Centisome position: 55.65

GC content: 53.33

Gene sequence:

>195_bases
GTGGAAGGCACCATCTGCGCCGTACTGGCAGGAACCATGTTCAAGGTGCGCCTTCCCAACGGGCACGAAGTGCTGGCCCA
TATTTCCGGCAAAATGCGCAAACGCTTTATCAAAATCGTGGTAGGGGACAAAGTGCGTATGGAAATGTCTCCTTATGACA
TGACCAAAGCGCGCATCACGTTCCGCATCGGTTAG

Upstream 100 bases:

>100_bases
CAGGCAACGCCCGCAAGGAGGCGGAGGACGCCACACCAAGGGCAGAAAGAATTTCAATAAATCAGAGTCCAAGGAAGAAA
ACTCCGAAAGTGAAATTGAA

Downstream 100 bases:

>100_bases
CTGCTCCCTGATCCGCTTCTTTTTAAAAACCTTCTCCGGCTTGCAGGAGAAGGTTTTTTAGCTTACAGTAAAGGCTGCCT
CTATCAGTATGCCATGAAAG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MEGTICAVLAGTMFKVRLPNGHEVLAHISGKMRKRFIKIVVGDKVRMEMSPYDMTKARITFRIG

Sequences:

>Translated_64_residues
MEGTICAVLAGTMFKVRLPNGHEVLAHISGKMRKRFIKIVVGDKVRMEMSPYDMTKARITFRIG
>Mature_64_residues
MEGTICAVLAGTMFKVRLPNGHEVLAHISGKMRKRFIKIVVGDKVRMEMSPYDMTKARITFRIG

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=62, Percent_Identity=59.6774193548387, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 7238; Mature: 7238

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
9.4 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
9.4 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTICAVLAGTMFKVRLPNGHEVLAHISGKMRKRFIKIVVGDKVRMEMSPYDMTKARIT
CCCEEEEEEECEEEEEECCCCCEEEEEHHHHHHHEEEEEEECCEEEEEECCCCCCEEEEE
FRIG
EEEC
>Mature Secondary Structure
MEGTICAVLAGTMFKVRLPNGHEVLAHISGKMRKRFIKIVVGDKVRMEMSPYDMTKARIT
CCCEEEEEEECEEEEEECCCCCEEEEEHHHHHHHEEEEEEECCEEEEEECCCCCCEEEEE
FRIG
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA