Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735711
Identifier: 187735711
GI number: 187735711
Start: 1456607
End: 1457023
Strand: Direct
Name: 187735711
Synonym: Amuc_1217
Alternate gene names: NA
Gene position: 1456607-1457023 (Clockwise)
Preceding gene: 187735707
Following gene: 187735714
Centisome position: 54.68
GC content: 52.04
Gene sequence:
>417_bases ATGATGAAGCGAAATCTCATTCCTTCTACGGCTTTTTTGGCGGCGTTAGTGTTTGTTGCCTGTGACGGCGGCAAGAAGCA GGATCATCCCCGGGATGTTTCGGTTCCCAGCGAACAGGCCGTTCCTAAAACTCCGGGAGAAAAAATTCTGGCCGTTCTGC TGCTTATTCAGGATCAGGCTACGGCAAACGCCCACGCGGCGGAGGTGAAAGAGCTGGCTGCCTCCCTGCCCGGGGATATT CCCAATGAAGAAGCCGTAAATATTGCAAATGAATTGATGCGTCTGGCCAGCCGGGAATGTTATGGTTCTTCGTCTCTGGA AGATGCTTTGAAAGGAATTCATTTCGATACCGGGGAATACACGGGCAGTGTGCCTCTGGATGTGGATGGATTTGAACCTA CCGCGGAAGAGCCGTAA
Upstream 100 bases:
>100_bases GCCTGAAAAACAGTTTTTAAGGATAAAAACTGATTTGACTCCGGAATCTTCAGTGTTCATGATGAATTCAATGAGGCCTC CGGCTTTTCAACCAATCATC
Downstream 100 bases:
>100_bases AAATAAATTCCCCGTGCCGGGAATTGGGTAATTACTCCAATGTTCCTCTCCATTCCGTTTTGCCGGAATGAAGGGTGGTT TGATATGGTATCAGGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MMKRNLIPSTAFLAALVFVACDGGKKQDHPRDVSVPSEQAVPKTPGEKILAVLLLIQDQATANAHAAEVKELAASLPGDI PNEEAVNIANELMRLASRECYGSSSLEDALKGIHFDTGEYTGSVPLDVDGFEPTAEEP
Sequences:
>Translated_138_residues MMKRNLIPSTAFLAALVFVACDGGKKQDHPRDVSVPSEQAVPKTPGEKILAVLLLIQDQATANAHAAEVKELAASLPGDI PNEEAVNIANELMRLASRECYGSSSLEDALKGIHFDTGEYTGSVPLDVDGFEPTAEEP >Mature_138_residues MMKRNLIPSTAFLAALVFVACDGGKKQDHPRDVSVPSEQAVPKTPGEKILAVLLLIQDQATANAHAAEVKELAASLPGDI PNEEAVNIANELMRLASRECYGSSSLEDALKGIHFDTGEYTGSVPLDVDGFEPTAEEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14673; Mature: 14673
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRNLIPSTAFLAALVFVACDGGKKQDHPRDVSVPSEQAVPKTPGEKILAVLLLIQDQA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC TANAHAAEVKELAASLPGDIPNEEAVNIANELMRLASRECYGSSSLEDALKGIHFDTGEY CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC TGSVPLDVDGFEPTAEEP CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKRNLIPSTAFLAALVFVACDGGKKQDHPRDVSVPSEQAVPKTPGEKILAVLLLIQDQA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC TANAHAAEVKELAASLPGDIPNEEAVNIANELMRLASRECYGSSSLEDALKGIHFDTGEY CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC TGSVPLDVDGFEPTAEEP CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA