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The map label for this gene is yoaA [C]

Identifier: 187735691

GI number: 187735691

Start: 1433207

End: 1435192

Strand: Direct

Name: yoaA [C]

Synonym: Amuc_1197

Alternate gene names: 187735691

Gene position: 1433207-1435192 (Clockwise)

Preceding gene: 187735690

Following gene: 187735695

Centisome position: 53.8

GC content: 58.71

Gene sequence:

>1986_bases
ATGAAGGCCGCCGGGGAAGAGGGCATGGAAGGCGTCAGCGCTTTTGAGGCTTATGTCCACCGGGCATTTGCCCCGGACGG
ATTGTTTTCCCGTGCCAGGGATTTTGAGTACCGGGCGGAGCAGCAGAGCATGGCCCTGGCTGTGGCGAGGGCGCTCCAAG
TGGATGCGCCGCTGCTGGTGGAGGCCGGCACAGGCGTGGGCAAGTCCCTGGGGTATTTGCTGCCGGCGGTGAAGTTTGCT
TTGGATTTTGACCGGAAGGCGGTGATTTCCACGCATACCATCAATTTGCAGGAGCAGTTGTTCAACAAGGATATTCCGCT
GCTGCGCACCGCCCTGGGGATTGATTTTTCCGCCGCCCTGCTGAAGGGCAGGCAGAATTACCTGTGCCATACCCGCCTGC
GGCGCGCGCTGGCGCAGATGGATTCCCTCTTTACGCAGGGTGAGGCCGCGGAGTTGAAGAGGATCCAGGACTGGGCCCTG
AGAACGCAGGACGGCACCCTGAGCGATATGGCATTCCGGCCGTCTTCCAAGGTATGGGCCATGGTCTGCAGCGAACCGCA
TGCGTGCAGCATGCGCCATTGCGGCCCTTCCTGTCCGTACCAGGCAGCCCGCAAGCGGGTTCTGGAGGCCAAAGTAGTGG
TGCTTAACCATACCCTGTTTTTCGGGCTGATGGCCCAGGCGGAGGATTCCGAGGAGGCGGGGTTCGTGTTTCCCGGGGAT
TTTGTGATTCTGGACGAGGCTCACATGATTGAGAACATCGCCGCCCGCCAGCTAGGCGTCCAGCTCTCGGAACCGCATTT
GAATTATGAATTGCTGCGGATGTACAATCCGCGCACGCACAAGGGGTTGCTGAAACCGCTGAACAATCCGTCCCTGTTTC
AGCGGGTTCAGGACGTGATGGACGCCTCCGGCCTGTTTTTCCAGAATGCGCGGGATGACCTGGGGTTTGCTGGTTCCGGA
AAGATTGTCCGCATTCTTCAGCCGGAGTGGTCGCAGGATATTCTTTCTCAGCCTTTGATGGAACTGATCGGGGAATTGAA
AACGGAGAGGGAGAAACAGGAGGAAAATGCAGCCGTGAAGGATGAACTGGCGGATATGGCCGCCCGGATGGAGGAGGCGC
AGGCTTCCCTGAAGGTGCTGATGGACATGACGGAGGAAGGTCACGTATATTGGGCGGAGCGTTCCGGTCCGGATGGAAGG
AACATGAGCGTTTGCTCCGCTCCCGTGGAGGTGGGAGATATTTTGAGGGAACGCCTGTTTTCCGCCGGACGTTCCGCCAT
TCTGACTTCCGCCACGCTGGGGACCGGAGATGCGGACATGAGTTATTTTGCGGGGCGCGTAGGGGCGGAACGCATTCGGA
AGCTTCAGATCGGAAGCCCGTTCAATTACCGGGAGCAGATGCGGCTGATTGTAGCCCGCTCCATGCCGGAGCCGGACCAG
CCGGAGTATGCGGAAGTTTTGCCGGAATGGATTAAAAGGTATCTGGCGGAGTCCCGCGGCAGGGCTTTCGTGCTGTTTAC
CAGCTATCGTCTGATGGTTCAGGCGGCGGAGAAAGTGCGTCCTTTTTGCGAGGAACAGGGATGGACGCTGTATGTGCAGG
GGCAGGATATGCAGCGGCATGCCATGCTGGAGGCGTTCCGGAAGGATGTGGACAGCGTGCTTTTCGGAACGGACAGTTTC
TGGACCGGGGTGGATGTGCCGGGAGAATCTCTTTCCAACGTTATTGTCACGCGCTTGCCGTTTGAAGTGCCGGATCATCC
GCTTGTGGAGTCCCGTTTTGAGAGTATCAGGGAACGCGGGGGGAATCCGTTTTACGAATATTCCGTACCTGTAGCCATTC
TGAAGCTGCGGCAGGGGGTAGGGCGGCTGATCCGCACCAGGAGCGATTCCGGCATGGTGGTGATTCTTGATCCGCGCGTA
GCTACCAAGAGGTATGGAATGCGTTTTCTCAAGTCCCTGCCGGAGGCCCGGCTGGAGTTTGTATGA

Upstream 100 bases:

>100_bases
TGCGCTCCATGTTCTATGACCTGCCTGAAAAGGTGAATCTTCCGCCGGTTTCTTCCCGCCAGCTTCCCGTGGGCCAGTAA
GGGGGGGCAGGTTCCCACAT

Downstream 100 bases:

>100_bases
GTTTTTTTCAGGATGCCCCGGAATTGTTCCGTTGCCTCTCCTGCCGCATCAGGAGGTAGCTGAGGGGTTGTTCCAGGCGC
GCTTCTTCCAGAAGGGAGCG

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MKAAGEEGMEGVSAFEAYVHRAFAPDGLFSRARDFEYRAEQQSMALAVARALQVDAPLLVEAGTGVGKSLGYLLPAVKFA
LDFDRKAVISTHTINLQEQLFNKDIPLLRTALGIDFSAALLKGRQNYLCHTRLRRALAQMDSLFTQGEAAELKRIQDWAL
RTQDGTLSDMAFRPSSKVWAMVCSEPHACSMRHCGPSCPYQAARKRVLEAKVVVLNHTLFFGLMAQAEDSEEAGFVFPGD
FVILDEAHMIENIAARQLGVQLSEPHLNYELLRMYNPRTHKGLLKPLNNPSLFQRVQDVMDASGLFFQNARDDLGFAGSG
KIVRILQPEWSQDILSQPLMELIGELKTEREKQEENAAVKDELADMAARMEEAQASLKVLMDMTEEGHVYWAERSGPDGR
NMSVCSAPVEVGDILRERLFSAGRSAILTSATLGTGDADMSYFAGRVGAERIRKLQIGSPFNYREQMRLIVARSMPEPDQ
PEYAEVLPEWIKRYLAESRGRAFVLFTSYRLMVQAAEKVRPFCEEQGWTLYVQGQDMQRHAMLEAFRKDVDSVLFGTDSF
WTGVDVPGESLSNVIVTRLPFEVPDHPLVESRFESIRERGGNPFYEYSVPVAILKLRQGVGRLIRTRSDSGMVVILDPRV
ATKRYGMRFLKSLPEARLEFV

Sequences:

>Translated_661_residues
MKAAGEEGMEGVSAFEAYVHRAFAPDGLFSRARDFEYRAEQQSMALAVARALQVDAPLLVEAGTGVGKSLGYLLPAVKFA
LDFDRKAVISTHTINLQEQLFNKDIPLLRTALGIDFSAALLKGRQNYLCHTRLRRALAQMDSLFTQGEAAELKRIQDWAL
RTQDGTLSDMAFRPSSKVWAMVCSEPHACSMRHCGPSCPYQAARKRVLEAKVVVLNHTLFFGLMAQAEDSEEAGFVFPGD
FVILDEAHMIENIAARQLGVQLSEPHLNYELLRMYNPRTHKGLLKPLNNPSLFQRVQDVMDASGLFFQNARDDLGFAGSG
KIVRILQPEWSQDILSQPLMELIGELKTEREKQEENAAVKDELADMAARMEEAQASLKVLMDMTEEGHVYWAERSGPDGR
NMSVCSAPVEVGDILRERLFSAGRSAILTSATLGTGDADMSYFAGRVGAERIRKLQIGSPFNYREQMRLIVARSMPEPDQ
PEYAEVLPEWIKRYLAESRGRAFVLFTSYRLMVQAAEKVRPFCEEQGWTLYVQGQDMQRHAMLEAFRKDVDSVLFGTDSF
WTGVDVPGESLSNVIVTRLPFEVPDHPLVESRFESIRERGGNPFYEYSVPVAILKLRQGVGRLIRTRSDSGMVVILDPRV
ATKRYGMRFLKSLPEARLEFV
>Mature_661_residues
MKAAGEEGMEGVSAFEAYVHRAFAPDGLFSRARDFEYRAEQQSMALAVARALQVDAPLLVEAGTGVGKSLGYLLPAVKFA
LDFDRKAVISTHTINLQEQLFNKDIPLLRTALGIDFSAALLKGRQNYLCHTRLRRALAQMDSLFTQGEAAELKRIQDWAL
RTQDGTLSDMAFRPSSKVWAMVCSEPHACSMRHCGPSCPYQAARKRVLEAKVVVLNHTLFFGLMAQAEDSEEAGFVFPGD
FVILDEAHMIENIAARQLGVQLSEPHLNYELLRMYNPRTHKGLLKPLNNPSLFQRVQDVMDASGLFFQNARDDLGFAGSG
KIVRILQPEWSQDILSQPLMELIGELKTEREKQEENAAVKDELADMAARMEEAQASLKVLMDMTEEGHVYWAERSGPDGR
NMSVCSAPVEVGDILRERLFSAGRSAILTSATLGTGDADMSYFAGRVGAERIRKLQIGSPFNYREQMRLIVARSMPEPDQ
PEYAEVLPEWIKRYLAESRGRAFVLFTSYRLMVQAAEKVRPFCEEQGWTLYVQGQDMQRHAMLEAFRKDVDSVLFGTDSF
WTGVDVPGESLSNVIVTRLPFEVPDHPLVESRFESIRERGGNPFYEYSVPVAILKLRQGVGRLIRTRSDSGMVVILDPRV
ATKRYGMRFLKSLPEARLEFV

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=643, Percent_Identity=34.6811819595645, Blast_Score=316, Evalue=4e-87,
Organism=Escherichia coli, GI1787018, Length=680, Percent_Identity=28.3823529411765, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74255; Mature: 74255

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAGEEGMEGVSAFEAYVHRAFAPDGLFSRARDFEYRAEQQSMALAVARALQVDAPLLV
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
EAGTGVGKSLGYLLPAVKFALDFDRKAVISTHTINLQEQLFNKDIPLLRTALGIDFSAAL
ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHCCCCHHHHHHHCCCHHHHH
LKGRQNYLCHTRLRRALAQMDSLFTQGEAAELKRIQDWALRTQDGTLSDMAFRPSSKVWA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCEECCCCCEEE
MVCSEPHACSMRHCGPSCPYQAARKRVLEAKVVVLNHTLFFGLMAQAEDSEEAGFVFPGD
EEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
FVILDEAHMIENIAARQLGVQLSEPHLNYELLRMYNPRTHKGLLKPLNNPSLFQRVQDVM
EEEECCHHHHHHHHHHHHCCEECCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
DASGLFFQNARDDLGFAGSGKIVRILQPEWSQDILSQPLMELIGELKTEREKQEENAAVK
CCCCCEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELADMAARMEEAQASLKVLMDMTEEGHVYWAERSGPDGRNMSVCSAPVEVGDILRERLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
SAGRSAILTSATLGTGDADMSYFAGRVGAERIRKLQIGSPFNYREQMRLIVARSMPEPDQ
HCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCC
PEYAEVLPEWIKRYLAESRGRAFVLFTSYRLMVQAAEKVRPFCEEQGWTLYVQGQDMQRH
CCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
AMLEAFRKDVDSVLFGTDSFWTGVDVPGESLSNVIVTRLPFEVPDHPLVESRFESIRERG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
GNPFYEYSVPVAILKLRQGVGRLIRTRSDSGMVVILDPRVATKRYGMRFLKSLPEARLEF
CCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCC
V
C
>Mature Secondary Structure
MKAAGEEGMEGVSAFEAYVHRAFAPDGLFSRARDFEYRAEQQSMALAVARALQVDAPLLV
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
EAGTGVGKSLGYLLPAVKFALDFDRKAVISTHTINLQEQLFNKDIPLLRTALGIDFSAAL
ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHCCCCHHHHHHHCCCHHHHH
LKGRQNYLCHTRLRRALAQMDSLFTQGEAAELKRIQDWALRTQDGTLSDMAFRPSSKVWA
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHCEECCCCCEEE
MVCSEPHACSMRHCGPSCPYQAARKRVLEAKVVVLNHTLFFGLMAQAEDSEEAGFVFPGD
EEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
FVILDEAHMIENIAARQLGVQLSEPHLNYELLRMYNPRTHKGLLKPLNNPSLFQRVQDVM
EEEECCHHHHHHHHHHHHCCEECCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHH
DASGLFFQNARDDLGFAGSGKIVRILQPEWSQDILSQPLMELIGELKTEREKQEENAAVK
CCCCCEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELADMAARMEEAQASLKVLMDMTEEGHVYWAERSGPDGRNMSVCSAPVEVGDILRERLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
SAGRSAILTSATLGTGDADMSYFAGRVGAERIRKLQIGSPFNYREQMRLIVARSMPEPDQ
HCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCC
PEYAEVLPEWIKRYLAESRGRAFVLFTSYRLMVQAAEKVRPFCEEQGWTLYVQGQDMQRH
CCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
AMLEAFRKDVDSVLFGTDSFWTGVDVPGESLSNVIVTRLPFEVPDHPLVESRFESIRERG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
GNPFYEYSVPVAILKLRQGVGRLIRTRSDSGMVVILDPRVATKRYGMRFLKSLPEARLEF
CCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]