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The map label for this gene is yqgF [C]

Identifier: 187735685

GI number: 187735685

Start: 1427490

End: 1427915

Strand: Reverse

Name: yqgF [C]

Synonym: Amuc_1191

Alternate gene names: 187735685

Gene position: 1427915-1427490 (Counterclockwise)

Preceding gene: 187735686

Following gene: 187735683

Centisome position: 53.6

GC content: 61.27

Gene sequence:

>426_bases
ATGACCAGTCCGCACCCCGCCCTGGGCATCGACTACGGAGAAGCCCGCATCGGCATTGCCGCCACGGACCCCGTGGGCAT
CATGGCCCATCCCGTAGAAACTATCCACAGGCATCAGACGGACGGAATTTCCCGCATTGTCCAGCTCGTCCAGGAACGGG
GAATACGCACCCTGGTGCTGGGCCTTCCCGTCCGCATGGACGGCACGGAAGGGACCGCCGCAGCCAAGGTGCGTGCATTC
GGCAGGGAACTGGCCGCAGCCCTTCCAGGCCTTCCCCTGATTTTCATGGATGAATGCCTCACCACCGTCATTGCCCAGGA
AAAACTGCACGCCGCCGGCAAAAAGGCAAAAAACTTCCGCCCCATCATCGACCAGGTAGCCGCTGTGGAAATACTCAACA
CCTGGCTTGATTCCACGCTGGGCTGA

Upstream 100 bases:

>100_bases
ACCTGATTGTGGTGGAAACGGCGGACGCCATCCTCATTGCGGATAAAAACAAGGCGGACGAAATCAAGAAAATCGTCAAC
CAGCTTCCGGACGAACTCAG

Downstream 100 bases:

>100_bases
AACCAAACGGCGCGCACGCGCCGTCCCTCCCGGGTCTGCGGATGGGAACGCACTTCCGGTGCCCAGACATCCAGAGAAAG
CCCGGACGGGTTCATGATCC

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTSPHPALGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDGISRIVQLVQERGIRTLVLGLPVRMDGTEGTAAAKVRAF
GRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQVAAVEILNTWLDSTLG

Sequences:

>Translated_141_residues
MTSPHPALGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDGISRIVQLVQERGIRTLVLGLPVRMDGTEGTAAAKVRAF
GRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQVAAVEILNTWLDSTLG
>Mature_140_residues
TSPHPALGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDGISRIVQLVQERGIRTLVLGLPVRMDGTEGTAAAKVRAFG
RELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQVAAVEILNTWLDSTLG

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 15095; Mature: 14964

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPHPALGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDGISRIVQLVQERGIRTLVL
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
GLPVRMDGTEGTAAAKVRAFGRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFR
ECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PIIDQVAAVEILNTWLDSTLG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSPHPALGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDGISRIVQLVQERGIRTLVL
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEE
GLPVRMDGTEGTAAAKVRAFGRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFR
ECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PIIDQVAAVEILNTWLDSTLG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA