Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735661
Identifier: 187735661
GI number: 187735661
Start: 1401354
End: 1402802
Strand: Reverse
Name: 187735661
Synonym: Amuc_1167
Alternate gene names: NA
Gene position: 1402802-1401354 (Counterclockwise)
Preceding gene: 187735662
Following gene: 187735660
Centisome position: 52.66
GC content: 55.07
Gene sequence:
>1449_bases ATGAATACCACCCGCTCTCTTGATTTCCCCATATGGATGCCCTCCGCTCTGGTCAAGGAATTGCGCCAGGGTCTCAGAAC GCCGTCATTCATCCTCCTGGTCAGCATAGTGCCCTCCCTGCTCTCCTTTTTCTTCCTGTTCAGCTTCATCATCAATCCTC TTGACGGGGAGCCCTTCGTCAGCCCCGACGGATGCCAGATCATCTTCTGGGTTACCATGGTCGTCGCCCTGCTCTTCATC ATGCCGCTGAGGGCCTCCACCTCCATCAGGAACGAACTGCTCACCCGAAACAACGAACTGCTGCTGCTCACCAGGCAGAG CGCAGGCCGCATCGTGCTGGGAAAATGGATATCCTTCATGGCCCAATCCCTGCTGATTGCCTTTATCTCCCTGCCCTTCT TTCTCATCCGGTATTACTACGGAGAAATTGACCTGGTACAGGATGTAACCCTGTTTTTCCTCCTTTACCTGGGTTCCGGC ATGCTGACTGCATATACCCTGTGGGCGTCCGCCATGCCCTCTCTGATGCGCATCATCGCTTTCTCCCTCATGGGAATCGG TATATTGACCCTGGGAGGCAACCATGCGGAGCTGGATTTTTTCCGGGATGGAGCGGGAGAAGGCGTTCTCCTGATATTCC TCGTCCTGGCGGACGCCTTCCTGGTCATCTCATCCCTGCTTCTGCTGGCAAGGGAATGGTTCTCCCCTGCCGCACAAAAC ACGGCCGCCCCCCTGCGGAAGCTTCTGCTGGCTTTTTTCGCAGCCTCCATCCTCCCCCTCCCCTTTCTGGAAAACGCAAG CGGCTCCATTCAAAACATCATGACCGGAAATTCCATTTTTGTCATGGTTTACGGAATTTTCCTGATGATTATCAACCTGA ACACGCCTGCCCGCCTCCTTCCCATCCACATGGAGCAAATGAAAAACAAAAGATTCTCCAGGCTCCAGCAGCTGCTGTTC CTCCCCGGCATGCCGGGGAGCGTCCTGTTCACCCTGTTGCTCTGCGCCATGGCGGCTATCGCCGTGTATCTGATAGACCG CATGGCATCCGTCCCCGAATTCCAGTCCCCTCAACGGCTCTTTTGCCTCGCAGCAGGCGGCTGGTACGCCATCACCATGC CGGCCATGCTTCTGAAACCGTTCTGGGAAAAACTGAAAAACAATACCCTACTGACGTACACCATGATCTGCCTCATCCTA TGCCTGGTGCAAAACGTGCTGTGGGGCGTGAATCTGTCCGTCCCCCTTCTCCCCGGAGGGTATTTATCTGAACTTTTGAG ACAAGAAACATTGCCGGCTTTCAGCAAATTTTCCCTGTTCAGCCTGATGGACCTGGCTGCCGGAATAGCGGTGCTGGCTC TCACCAGCAAACACTGGTTTGACATATTCCGGAACGCATCCCCCGAACCTCTCCAGAAACCGGGAAATTCCCGCCGGGAA CGGGAATAG
Upstream 100 bases:
>100_bases TGGAAGAAGCTTTTGTGGACATCCTTATCCACGGCAGCGGGGAACCGGCCCCGCGGCAGAATCCCGCCTCTTCCCAGGAA ACCCCATCCATCCCCGCCTC
Downstream 100 bases:
>100_bases TTCTTGCCCGCCGTTTTGCCTCCCCCCCATCCCCATGACCTCTTTCCCCTTCCCCAGCCAGGTGATCCAGCCGGACGCCG AACAGGCGGCGCGCCGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNTTRSLDFPIWMPSALVKELRQGLRTPSFILLVSIVPSLLSFFFLFSFIINPLDGEPFVSPDGCQIIFWVTMVVALLFI MPLRASTSIRNELLTRNNELLLLTRQSAGRIVLGKWISFMAQSLLIAFISLPFFLIRYYYGEIDLVQDVTLFFLLYLGSG MLTAYTLWASAMPSLMRIIAFSLMGIGILTLGGNHAELDFFRDGAGEGVLLIFLVLADAFLVISSLLLLAREWFSPAAQN TAAPLRKLLLAFFAASILPLPFLENASGSIQNIMTGNSIFVMVYGIFLMIINLNTPARLLPIHMEQMKNKRFSRLQQLLF LPGMPGSVLFTLLLCAMAAIAVYLIDRMASVPEFQSPQRLFCLAAGGWYAITMPAMLLKPFWEKLKNNTLLTYTMICLIL CLVQNVLWGVNLSVPLLPGGYLSELLRQETLPAFSKFSLFSLMDLAAGIAVLALTSKHWFDIFRNASPEPLQKPGNSRRE RE
Sequences:
>Translated_482_residues MNTTRSLDFPIWMPSALVKELRQGLRTPSFILLVSIVPSLLSFFFLFSFIINPLDGEPFVSPDGCQIIFWVTMVVALLFI MPLRASTSIRNELLTRNNELLLLTRQSAGRIVLGKWISFMAQSLLIAFISLPFFLIRYYYGEIDLVQDVTLFFLLYLGSG MLTAYTLWASAMPSLMRIIAFSLMGIGILTLGGNHAELDFFRDGAGEGVLLIFLVLADAFLVISSLLLLAREWFSPAAQN TAAPLRKLLLAFFAASILPLPFLENASGSIQNIMTGNSIFVMVYGIFLMIINLNTPARLLPIHMEQMKNKRFSRLQQLLF LPGMPGSVLFTLLLCAMAAIAVYLIDRMASVPEFQSPQRLFCLAAGGWYAITMPAMLLKPFWEKLKNNTLLTYTMICLIL CLVQNVLWGVNLSVPLLPGGYLSELLRQETLPAFSKFSLFSLMDLAAGIAVLALTSKHWFDIFRNASPEPLQKPGNSRRE RE >Mature_482_residues MNTTRSLDFPIWMPSALVKELRQGLRTPSFILLVSIVPSLLSFFFLFSFIINPLDGEPFVSPDGCQIIFWVTMVVALLFI MPLRASTSIRNELLTRNNELLLLTRQSAGRIVLGKWISFMAQSLLIAFISLPFFLIRYYYGEIDLVQDVTLFFLLYLGSG MLTAYTLWASAMPSLMRIIAFSLMGIGILTLGGNHAELDFFRDGAGEGVLLIFLVLADAFLVISSLLLLAREWFSPAAQN TAAPLRKLLLAFFAASILPLPFLENASGSIQNIMTGNSIFVMVYGIFLMIINLNTPARLLPIHMEQMKNKRFSRLQQLLF LPGMPGSVLFTLLLCAMAAIAVYLIDRMASVPEFQSPQRLFCLAAGGWYAITMPAMLLKPFWEKLKNNTLLTYTMICLIL CLVQNVLWGVNLSVPLLPGGYLSELLRQETLPAFSKFSLFSLMDLAAGIAVLALTSKHWFDIFRNASPEPLQKPGNSRRE RE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53956; Mature: 53956
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTRSLDFPIWMPSALVKELRQGLRTPSFILLVSIVPSLLSFFFLFSFIINPLDGEPFV CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPDGCQIIFWVTMVVALLFIMPLRASTSIRNELLTRNNELLLLTRQSAGRIVLGKWISFM CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH AQSLLIAFISLPFFLIRYYYGEIDLVQDVTLFFLLYLGSGMLTAYTLWASAMPSLMRIIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FSLMGIGILTLGGNHAELDFFRDGAGEGVLLIFLVLADAFLVISSLLLLAREWFSPAAQN HHHHHHHHEEECCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC TAAPLRKLLLAFFAASILPLPFLENASGSIQNIMTGNSIFVMVYGIFLMIINLNTPARLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH PIHMEQMKNKRFSRLQQLLFLPGMPGSVLFTLLLCAMAAIAVYLIDRMASVPEFQSPQRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE FCLAAGGWYAITMPAMLLKPFWEKLKNNTLLTYTMICLILCLVQNVLWGVNLSVPLLPGG EEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH YLSELLRQETLPAFSKFSLFSLMDLAAGIAVLALTSKHWFDIFRNASPEPLQKPGNSRRE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC RE CC >Mature Secondary Structure MNTTRSLDFPIWMPSALVKELRQGLRTPSFILLVSIVPSLLSFFFLFSFIINPLDGEPFV CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPDGCQIIFWVTMVVALLFIMPLRASTSIRNELLTRNNELLLLTRQSAGRIVLGKWISFM CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH AQSLLIAFISLPFFLIRYYYGEIDLVQDVTLFFLLYLGSGMLTAYTLWASAMPSLMRIIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FSLMGIGILTLGGNHAELDFFRDGAGEGVLLIFLVLADAFLVISSLLLLAREWFSPAAQN HHHHHHHHEEECCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC TAAPLRKLLLAFFAASILPLPFLENASGSIQNIMTGNSIFVMVYGIFLMIINLNTPARLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH PIHMEQMKNKRFSRLQQLLFLPGMPGSVLFTLLLCAMAAIAVYLIDRMASVPEFQSPQRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE FCLAAGGWYAITMPAMLLKPFWEKLKNNTLLTYTMICLILCLVQNVLWGVNLSVPLLPGG EEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH YLSELLRQETLPAFSKFSLFSLMDLAAGIAVLALTSKHWFDIFRNASPEPLQKPGNSRRE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC RE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA