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The map label for this gene is 187735652

Identifier: 187735652

GI number: 187735652

Start: 1388421

End: 1389017

Strand: Direct

Name: 187735652

Synonym: Amuc_1158

Alternate gene names: NA

Gene position: 1388421-1389017 (Clockwise)

Preceding gene: 187735651

Following gene: 187735653

Centisome position: 52.12

GC content: 56.45

Gene sequence:

>597_bases
ATGACGCAAGCAGAAACAGCATGCCCGGATGCCTGGGGAAGCCATTTCCTTGAATACCGGGGAAGGCTTCTTGCCCTGGC
CCGGAGGAATTTGAATCCGGTTCTTGCCCGGCGCGTTTCGGCGGAAGATGTGGTTCAGGAGGCTCTGCTGGCAGCCTGCG
GGAAAATGGCTTTTTTTGAAAACAATCCGGAGATTCCTGTCTATTTCAAACTGCGGACGATTCTGTTCCAGACCCTTACG
GCTATGGAAAGGAAGCATCTGCAATGCCTCAAGAGAGACGCCTGCAGGGAAGTGAATGTGACGGATGACGGCGTGGGGCC
CGCTGCCCGGTTGGATTGGAACCGGTTTGCAGATACCGTGACCGGGCCTCTTACCCGTGCCGTCAGGGCGGATCGTTATA
CATTGCTCCGGAAAGCGGTCGAGGCGCTGCCCGAAAACGATCGGCAGATTCTTGAACTCCGCCATTTTGACGACATGTCC
AATGCGGATTGTGCCGAAGTCCTGCATATTGGGCCGAAAGCCGCAAGCATCCGCTATGTGCGGGCGCTGCAGCGGCTTCG
GAAGCAGCTGATGGAGTTAACCGAGTTTCAGCCATGA

Upstream 100 bases:

>100_bases
ATGCACCTGCCGTATCCCGGAATCGGCCGGATAGGAAGGAGTGCGGCGGGATATGTCTATCTGCCCGGAAAATGAGAAAG
GATAAAAAAGACACGGTACA

Downstream 100 bases:

>100_bases
AGGGGAAGATTTCTCTGGAAGATCTGGTTGAACAATTCCTGGATCAGTGCCGTTCCGGCAATGTTCCCGATATTCAGGAT
TTTGCCGGGGCGCATCCGGA

Product: RNA polymerase, sigma-24 subunit, ECF subfamily

Products: NA

Alternate protein names: RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor CnrH

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTQAETACPDAWGSHFLEYRGRLLALARRNLNPVLARRVSAEDVVQEALLAACGKMAFFENNPEIPVYFKLRTILFQTLT
AMERKHLQCLKRDACREVNVTDDGVGPAARLDWNRFADTVTGPLTRAVRADRYTLLRKAVEALPENDRQILELRHFDDMS
NADCAEVLHIGPKAASIRYVRALQRLRKQLMELTEFQP

Sequences:

>Translated_198_residues
MTQAETACPDAWGSHFLEYRGRLLALARRNLNPVLARRVSAEDVVQEALLAACGKMAFFENNPEIPVYFKLRTILFQTLT
AMERKHLQCLKRDACREVNVTDDGVGPAARLDWNRFADTVTGPLTRAVRADRYTLLRKAVEALPENDRQILELRHFDDMS
NADCAEVLHIGPKAASIRYVRALQRLRKQLMELTEFQP
>Mature_197_residues
TQAETACPDAWGSHFLEYRGRLLALARRNLNPVLARRVSAEDVVQEALLAACGKMAFFENNPEIPVYFKLRTILFQTLTA
MERKHLQCLKRDACREVNVTDDGVGPAARLDWNRFADTVTGPLTRAVRADRYTLLRKAVEALPENDRQILELRHFDDMSN
ADCAEVLHIGPKAASIRYVRALQRLRKQLMELTEFQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22595; Mature: 22464

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAETACPDAWGSHFLEYRGRLLALARRNLNPVLARRVSAEDVVQEALLAACGKMAFFE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCC
NNPEIPVYFKLRTILFQTLTAMERKHLQCLKRDACREVNVTDDGVGPAARLDWNRFADTV
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHH
TGPLTRAVRADRYTLLRKAVEALPENDRQILELRHFDDMSNADCAEVLHIGPKAASIRYV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHH
RALQRLRKQLMELTEFQP
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQAETACPDAWGSHFLEYRGRLLALARRNLNPVLARRVSAEDVVQEALLAACGKMAFFE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCC
NNPEIPVYFKLRTILFQTLTAMERKHLQCLKRDACREVNVTDDGVGPAARLDWNRFADTV
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHH
TGPLTRAVRADRYTLLRKAVEALPENDRQILELRHFDDMSNADCAEVLHIGPKAASIRYV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHH
RALQRLRKQLMELTEFQP
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA