Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is lgt [H]
Identifier: 187735599
GI number: 187735599
Start: 1319281
End: 1320339
Strand: Direct
Name: lgt [H]
Synonym: Amuc_1104
Alternate gene names: 187735599
Gene position: 1319281-1320339 (Clockwise)
Preceding gene: 187735598
Following gene: 187735601
Centisome position: 49.52
GC content: 55.15
Gene sequence:
>1059_bases ATGAATCCGACCGTTTACGTACATGATCTGGACCCTGTCATCTGGCAGATAACGGACTCAATTGCCCTGCGCTGGTATGG CCTGGCCTATTTAATGGGCTTCATCGGCGGGTATTATCTGCTTTCCTGGCTTTCCCGCCGGAAGCTGTATCCTGTCCCCC AGGACAGGATGGCGGATTTTGTTACTTATGTGGCTATTTTTGGTGTTTTGATCGGCGGAAGGCTGGGATATGTGCTCTTT TACCAGATTCCCAATCACGGCTGGTCCCAGTTTCTGGCGGATCCGCTCATGGTCCTGAGGGTGTGGGAAGGGGGCATGGC CAGCCACGGGGGAATGATTGGAGTGGGGCTGTACACATTTTATTATGCGTGGAAGCACCGCGTCAAGTGGGTGGCGCTTC TGGACGGCCTGGCCATTGTAGCTCCCGTTGGGCTGTTTTTCGGGCGCATGGCCAATTTTATCAACGGGGAACTGTATGGG CGCGTTGTCCCGCTCGGCTCTTCCCAGGGAATGATTTTTCCGGCGGAGCTTTCCCAGAATCCGGACTTGTTCGTGCGGGT GGCTTCCCGTATTTATGAAACGCCCGGATTGTTGGACAAACTGTCCCTTTCCGGCATAGCCGTGCCGGAACGAATGACTG CCGCCTGGGTGACCGACCGGGTGAGGGATACGCCCGCCATCAGGGAAATCGTGGGGCGGATGATGCAGGATCATGCACGC TACCCCTCCCAGCTGTATGAAGCGTTTGCGGAAGGTGTGTTTCTTTTTGCCGTGCTGTGGTTTGTACGGGTAAGGTTCCC CCGTGCGTGGAACGGCTTGTTCTGCGGTATTTTTGCCGTTCTTTATGCTGCGGGCAGAATTATTTGCGAAGAGTACCGGG AGCCGGATTCCCCCTTCTCCATGGGATTAACCCGCGGGCAGTTCCTCTCCGTTTTCCTCGTGCTGGTGGGCGCCGCTTTC TTTGTATATGCCTTCAAGACCAGGCAGACGGTTCAGGAATGCGCTTTCTATGAACCTGAAAAGAAAGACGGGAATGAATC GTCCGGAAAGGCCGTTTAA
Upstream 100 bases:
>100_bases ACTACCGCGCCGCGGTGGAATTGACGGTGGCTCTGGCCCGTTCCCTGGACCAGGAGGCCGTGGAAGCCCTTACCCACTAC CTGCCCTGAAAGAAACGCTC
Downstream 100 bases:
>100_bases AACGGGTCCAGGTCAAATTCCCCTGTTTTGGGAATACTGCTGGCGGGACCAGCCTTGAAAATATCTGCAATGCAGCTGGA AAAAAGCCGCAAATTCCGTT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MNPTVYVHDLDPVIWQITDSIALRWYGLAYLMGFIGGYYLLSWLSRRKLYPVPQDRMADFVTYVAIFGVLIGGRLGYVLF YQIPNHGWSQFLADPLMVLRVWEGGMASHGGMIGVGLYTFYYAWKHRVKWVALLDGLAIVAPVGLFFGRMANFINGELYG RVVPLGSSQGMIFPAELSQNPDLFVRVASRIYETPGLLDKLSLSGIAVPERMTAAWVTDRVRDTPAIREIVGRMMQDHAR YPSQLYEAFAEGVFLFAVLWFVRVRFPRAWNGLFCGIFAVLYAAGRIICEEYREPDSPFSMGLTRGQFLSVFLVLVGAAF FVYAFKTRQTVQECAFYEPEKKDGNESSGKAV
Sequences:
>Translated_352_residues MNPTVYVHDLDPVIWQITDSIALRWYGLAYLMGFIGGYYLLSWLSRRKLYPVPQDRMADFVTYVAIFGVLIGGRLGYVLF YQIPNHGWSQFLADPLMVLRVWEGGMASHGGMIGVGLYTFYYAWKHRVKWVALLDGLAIVAPVGLFFGRMANFINGELYG RVVPLGSSQGMIFPAELSQNPDLFVRVASRIYETPGLLDKLSLSGIAVPERMTAAWVTDRVRDTPAIREIVGRMMQDHAR YPSQLYEAFAEGVFLFAVLWFVRVRFPRAWNGLFCGIFAVLYAAGRIICEEYREPDSPFSMGLTRGQFLSVFLVLVGAAF FVYAFKTRQTVQECAFYEPEKKDGNESSGKAV >Mature_352_residues MNPTVYVHDLDPVIWQITDSIALRWYGLAYLMGFIGGYYLLSWLSRRKLYPVPQDRMADFVTYVAIFGVLIGGRLGYVLF YQIPNHGWSQFLADPLMVLRVWEGGMASHGGMIGVGLYTFYYAWKHRVKWVALLDGLAIVAPVGLFFGRMANFINGELYG RVVPLGSSQGMIFPAELSQNPDLFVRVASRIYETPGLLDKLSLSGIAVPERMTAAWVTDRVRDTPAIREIVGRMMQDHAR YPSQLYEAFAEGVFLFAVLWFVRVRFPRAWNGLFCGIFAVLYAAGRIICEEYREPDSPFSMGLTRGQFLSVFLVLVGAAF FVYAFKTRQTVQECAFYEPEKKDGNESSGKAV
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=340, Percent_Identity=34.1176470588235, Blast_Score=154, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 39817; Mature: 39817
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTVYVHDLDPVIWQITDSIALRWYGLAYLMGFIGGYYLLSWLSRRKLYPVPQDRMADF CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VTYVAIFGVLIGGRLGYVLFYQIPNHGWSQFLADPLMVLRVWEGGMASHGGMIGVGLYTF HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YYAWKHRVKWVALLDGLAIVAPVGLFFGRMANFINGELYGRVVPLGSSQGMIFPAELSQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEEECCCCCC PDLFVRVASRIYETPGLLDKLSLSGIAVPERMTAAWVTDRVRDTPAIREIVGRMMQDHAR CHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC YPSQLYEAFAEGVFLFAVLWFVRVRFPRAWNGLFCGIFAVLYAAGRIICEEYREPDSPFS CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MGLTRGQFLSVFLVLVGAAFFVYAFKTRQTVQECAFYEPEKKDGNESSGKAV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPTVYVHDLDPVIWQITDSIALRWYGLAYLMGFIGGYYLLSWLSRRKLYPVPQDRMADF CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VTYVAIFGVLIGGRLGYVLFYQIPNHGWSQFLADPLMVLRVWEGGMASHGGMIGVGLYTF HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YYAWKHRVKWVALLDGLAIVAPVGLFFGRMANFINGELYGRVVPLGSSQGMIFPAELSQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEEECCCCCC PDLFVRVASRIYETPGLLDKLSLSGIAVPERMTAAWVTDRVRDTPAIREIVGRMMQDHAR CHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC YPSQLYEAFAEGVFLFAVLWFVRVRFPRAWNGLFCGIFAVLYAAGRIICEEYREPDSPFS CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MGLTRGQFLSVFLVLVGAAFFVYAFKTRQTVQECAFYEPEKKDGNESSGKAV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA