Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735576
Identifier: 187735576
GI number: 187735576
Start: 1291848
End: 1292669
Strand: Direct
Name: 187735576
Synonym: Amuc_1081
Alternate gene names: NA
Gene position: 1291848-1292669 (Clockwise)
Preceding gene: 187735575
Following gene: 187735577
Centisome position: 48.49
GC content: 59.98
Gene sequence:
>822_bases ATGATTCAGGAACTTGATCTTGCTCCGGGGGAACGCGCCAGGTTTATTTCAGACATCCATTTCGGCCATGCCAAGGCGCT GGCCCGGGAGCCGGAAGAGCTGGGGTTTCTTCTGGAGGGGTGCTCCCATCTGGTAGTGTGCGGGGACCTCAGTGAAACCC GTGAAAGCCCCTGCCGGGAGGAAGGATTGGAAAAACGGGCCCGTTTCCTGCGGATGTGCCGGGATGCCGGGGTGCAGCCC GTTCTGCTGGCCGGCAACCATGATCCGGACGAGAAAGCCGGCCTGCTGAAATTGCAGGGCGGCCGCATCTGCGCTTTGCA CGGCCATGCGCTGTTCAGGGAGGTGGCTCCGTGGGGATGGGAATATTTGAAAAACAAGCAGGTTTCCCGCGAACTGATCG CAGCGTTCCCGGAGGCGGAGGCAGATTTGCTGCGGCGGCTGGAGCTGGCCCGTGCCATGAGTGTGCTGGTGCCTCCTGTT TATACGCGTTCCGGAACACATCAAAATAAACTGGTGCGTTTTTTAGCTCATTCTGCCTGGCCGCCGGAACGGCCCGTGCG GATTCTTCTGGCATGGCTGACGATGATGCGGCGCATGGGGAAATTTGCAGACCGTTTTTTTCCGGAAGCGGAAGTCGTCA TTTTTGGCCATCTTCACCGACGGGCGGTGAGCGGGAAAAAGGGGCGGCGGCTGTACATCAACCTGGGCGCCTGTTTCCGC CATGCCAGATGCTGGGCGGCGGACGTAACGCCGGAAAGAGGAGTCTCCATCCGCAGTTATACGCCCGGAGGATATGATGG CCCGGAGGCAATTCTCCGCTGA
Upstream 100 bases:
>100_bases TCCGTGCCTGAACGTATCTGTGGCTACGGGCGTATGCCTGTATGAAATGGTGCGGCAGCGTTCCTGATTCCATGACTGTT TTTCTCCCTCCCTCGTCTTT
Downstream 100 bases:
>100_bases TTGATGCCCACGGAAAAAAGTGAGGGGAACGCGTCCGTGTTTAGGCGATAATGTGTTAGAGCACCGGATGACTAGTCCAT ACAGTTTGTGGACGCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIQELDLAPGERARFISDIHFGHAKALAREPEELGFLLEGCSHLVVCGDLSETRESPCREEGLEKRARFLRMCRDAGVQP VLLAGNHDPDEKAGLLKLQGGRICALHGHALFREVAPWGWEYLKNKQVSRELIAAFPEAEADLLRRLELARAMSVLVPPV YTRSGTHQNKLVRFLAHSAWPPERPVRILLAWLTMMRRMGKFADRFFPEAEVVIFGHLHRRAVSGKKGRRLYINLGACFR HARCWAADVTPERGVSIRSYTPGGYDGPEAILR
Sequences:
>Translated_273_residues MIQELDLAPGERARFISDIHFGHAKALAREPEELGFLLEGCSHLVVCGDLSETRESPCREEGLEKRARFLRMCRDAGVQP VLLAGNHDPDEKAGLLKLQGGRICALHGHALFREVAPWGWEYLKNKQVSRELIAAFPEAEADLLRRLELARAMSVLVPPV YTRSGTHQNKLVRFLAHSAWPPERPVRILLAWLTMMRRMGKFADRFFPEAEVVIFGHLHRRAVSGKKGRRLYINLGACFR HARCWAADVTPERGVSIRSYTPGGYDGPEAILR >Mature_273_residues MIQELDLAPGERARFISDIHFGHAKALAREPEELGFLLEGCSHLVVCGDLSETRESPCREEGLEKRARFLRMCRDAGVQP VLLAGNHDPDEKAGLLKLQGGRICALHGHALFREVAPWGWEYLKNKQVSRELIAAFPEAEADLLRRLELARAMSVLVPPV YTRSGTHQNKLVRFLAHSAWPPERPVRILLAWLTMMRRMGKFADRFFPEAEVVIFGHLHRRAVSGKKGRRLYINLGACFR HARCWAADVTPERGVSIRSYTPGGYDGPEAILR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30834; Mature: 30834
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQELDLAPGERARFISDIHFGHAKALAREPEELGFLLEGCSHLVVCGDLSETRESPCRE CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHCCCHHH EGLEKRARFLRMCRDAGVQPVLLAGNHDPDEKAGLLKLQGGRICALHGHALFREVAPWGW HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCH EYLKNKQVSRELIAAFPEAEADLLRRLELARAMSVLVPPVYTRSGTHQNKLVRFLAHSAW HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC PPERPVRILLAWLTMMRRMGKFADRFFPEAEVVIFGHLHRRAVSGKKGRRLYINLGACFR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEEHHHHHH HARCWAADVTPERGVSIRSYTPGGYDGPEAILR HHHHEECCCCCCCCCEEEECCCCCCCCHHHHCC >Mature Secondary Structure MIQELDLAPGERARFISDIHFGHAKALAREPEELGFLLEGCSHLVVCGDLSETRESPCRE CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCHHHHHCCCHHH EGLEKRARFLRMCRDAGVQPVLLAGNHDPDEKAGLLKLQGGRICALHGHALFREVAPWGW HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCH EYLKNKQVSRELIAAFPEAEADLLRRLELARAMSVLVPPVYTRSGTHQNKLVRFLAHSAW HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC PPERPVRILLAWLTMMRRMGKFADRFFPEAEVVIFGHLHRRAVSGKKGRRLYINLGACFR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEEHHHHHH HARCWAADVTPERGVSIRSYTPGGYDGPEAILR HHHHEECCCCCCCCCEEEECCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA