Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is wcaA [C]
Identifier: 187735565
GI number: 187735565
Start: 1277393
End: 1278406
Strand: Reverse
Name: wcaA [C]
Synonym: Amuc_1070
Alternate gene names: 187735565
Gene position: 1278406-1277393 (Counterclockwise)
Preceding gene: 187735569
Following gene: 187735562
Centisome position: 47.99
GC content: 45.46
Gene sequence:
>1014_bases ATGATTTCAGCCATTCTTCTTTGTTACAATCAGAAACGTTTTATCAAGGAACAGTTCCGGGCTATTTTAAAACAGGATTA TCTAGGAGAATGGGAAATAATTATTTCGGACGATTTTTCTCAGGACGGTTCTTTTGAATGCCTGGAAGAAATGGTGGAAA AAGAGGGAGAAGGACGGCGTATTATTCTCCACCGTAACGAAAGCAACCGGGGAATTGCAGGGAATTTGCAATGTGCCGTT CATTTGTCCCGGGGGGAATGGATTATCAAGTTTGACGGCGATGACATCGCACGGGAAGACAGGATCTCCTCGTTGGCATC TCTGGCGGAAAAATATCCCGGTCATCTGGTTTACTGCCATTCTTATAATGAAATCGATGAAGATGGACAACCCGCTTATG GACGCATGTTGCCAGATTCAGATTCCGTCGTCGTCAAACCCTACAGGGAATGTATTTTTGACATTTCCCATGTTTACAGC TGTTTTGGCGGAAATGCCATGTACCACAGGTCTTTGTTCAGCGACTTCGAATATTTGCCTTCAGGGGCCGGCATTGCGGA CGATACAATGCTGTCCATGCGCGCCTATTTGAAAAAATCAGGCATGGTCGCATCCGGCAAACGGTGTTCGTACTATCGGA GACACAACAGTAATATCTGCAATTTTAAGAGCGGGAACCCCAGGACAATCCTGATCAAGAGATCGGAATTCCTGATAACA ACCTGGATAATGATCATGAAAGAGGTATACGGCAAGCATAAGTCCGGGGAAATAACATACCAGGCCGCCGATCGCCTGAT GAGGCTGATTCAGGCGGAACAGAGAAGGCTCCTGCTCTTCCCCTATGCTTCATTCGATAACAGCCTTCTTACCAAACTCA AATGGTTTTGGAACATTCTGCAATGCAGGCCGAGGCTCTGGCTGGTCAGCATTCCAAGATTGCTCCCGTTTTGCCTGCTG CAAAGGTATTTGAATATTAAAGACCGGATAAAAAGTTTTCCTTTTTTTCACTAA
Upstream 100 bases:
>100_bases AATCTCTTTTTAATTACAGCGGATTTGGAATTCCCCAATCGAATTTGGAATTCGTTATTTTTAGACAGTTTAAAAAAACT TAAACTGTTTATTCGATTTC
Downstream 100 bases:
>100_bases CAGCAGGGAACCTGCATAAAAAACAGGAAAAAAAAATAAACGTACCGTTATCCTGCTTCCCTCCATCATCGGGAAAACAA AAAAGCCGTTCCGCCGGACA
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: Exopolysaccharide Biosynthesis; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MISAILLCYNQKRFIKEQFRAILKQDYLGEWEIIISDDFSQDGSFECLEEMVEKEGEGRRIILHRNESNRGIAGNLQCAV HLSRGEWIIKFDGDDIAREDRISSLASLAEKYPGHLVYCHSYNEIDEDGQPAYGRMLPDSDSVVVKPYRECIFDISHVYS CFGGNAMYHRSLFSDFEYLPSGAGIADDTMLSMRAYLKKSGMVASGKRCSYYRRHNSNICNFKSGNPRTILIKRSEFLIT TWIMIMKEVYGKHKSGEITYQAADRLMRLIQAEQRRLLLFPYASFDNSLLTKLKWFWNILQCRPRLWLVSIPRLLPFCLL QRYLNIKDRIKSFPFFH
Sequences:
>Translated_337_residues MISAILLCYNQKRFIKEQFRAILKQDYLGEWEIIISDDFSQDGSFECLEEMVEKEGEGRRIILHRNESNRGIAGNLQCAV HLSRGEWIIKFDGDDIAREDRISSLASLAEKYPGHLVYCHSYNEIDEDGQPAYGRMLPDSDSVVVKPYRECIFDISHVYS CFGGNAMYHRSLFSDFEYLPSGAGIADDTMLSMRAYLKKSGMVASGKRCSYYRRHNSNICNFKSGNPRTILIKRSEFLIT TWIMIMKEVYGKHKSGEITYQAADRLMRLIQAEQRRLLLFPYASFDNSLLTKLKWFWNILQCRPRLWLVSIPRLLPFCLL QRYLNIKDRIKSFPFFH >Mature_337_residues MISAILLCYNQKRFIKEQFRAILKQDYLGEWEIIISDDFSQDGSFECLEEMVEKEGEGRRIILHRNESNRGIAGNLQCAV HLSRGEWIIKFDGDDIAREDRISSLASLAEKYPGHLVYCHSYNEIDEDGQPAYGRMLPDSDSVVVKPYRECIFDISHVYS CFGGNAMYHRSLFSDFEYLPSGAGIADDTMLSMRAYLKKSGMVASGKRCSYYRRHNSNICNFKSGNPRTILIKRSEFLIT TWIMIMKEVYGKHKSGEITYQAADRLMRLIQAEQRRLLLFPYASFDNSLLTKLKWFWNILQCRPRLWLVSIPRLLPFCLL QRYLNIKDRIKSFPFFH
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39363; Mature: 39363
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAILLCYNQKRFIKEQFRAILKQDYLGEWEIIISDDFSQDGSFECLEEMVEKEGEGRR CCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCE IILHRNESNRGIAGNLQCAVHLSRGEWIIKFDGDDIAREDRISSLASLAEKYPGHLVYCH EEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEC SYNEIDEDGQPAYGRMLPDSDSVVVKPYRECIFDISHVYSCFGGNAMYHRSLFSDFEYLP CCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SGAGIADDTMLSMRAYLKKSGMVASGKRCSYYRRHNSNICNFKSGNPRTILIKRSEFLIT CCCCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHCCCCCCEECCCCCEEEEEECCCHHHH TWIMIMKEVYGKHKSGEITYQAADRLMRLIQAEQRRLLLFPYASFDNSLLTKLKWFWNIL HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH QCRPRLWLVSIPRLLPFCLLQRYLNIKDRIKSFPFFH HHCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHCCCCC >Mature Secondary Structure MISAILLCYNQKRFIKEQFRAILKQDYLGEWEIIISDDFSQDGSFECLEEMVEKEGEGRR CCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCE IILHRNESNRGIAGNLQCAVHLSRGEWIIKFDGDDIAREDRISSLASLAEKYPGHLVYCH EEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEC SYNEIDEDGQPAYGRMLPDSDSVVVKPYRECIFDISHVYSCFGGNAMYHRSLFSDFEYLP CCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SGAGIADDTMLSMRAYLKKSGMVASGKRCSYYRRHNSNICNFKSGNPRTILIKRSEFLIT CCCCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHCCCCCCEECCCCCEEEEEECCCHHHH TWIMIMKEVYGKHKSGEITYQAADRLMRLIQAEQRRLLLFPYASFDNSLLTKLKWFWNIL HHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH QCRPRLWLVSIPRLLPFCLLQRYLNIKDRIKSFPFFH HHCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA