Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735561
Identifier: 187735561
GI number: 187735561
Start: 1272982
End: 1273566
Strand: Direct
Name: 187735561
Synonym: Amuc_1066
Alternate gene names: NA
Gene position: 1272982-1273566 (Clockwise)
Preceding gene: 187735552
Following gene: 187735563
Centisome position: 47.78
GC content: 57.26
Gene sequence:
>585_bases ATGGCGGCTTCCCTGGGTGTGTCTCCCGCCCAGGATGTGGCGAGCCCCGATGCCGCGGATCTGGATTTGGACCTGGTCAA ACTGAAAAGTGGCCCCAAGGGCAGACAGAGGGAGGCCATGAGGAAGGTCCTCCTGCTTGTGCATCTGAAGCAAAAGGAAA CGTGGCTGGCGGAATCCACGGGGGATGAGGCCGTGCATCTGGCGGCGGAGATTTCCTTCCGCCGGTATTTGGCTTCAGTG GATATGGACGGATGCCCGGAGGAATTCAGGCGCGCTTTCCTGCGGTATGCAAAGCTCCTGAATTCCTTTGAAGAAAAAGA TTTGAACAGTGTCGCGGATTTTCCTGCGGTCCCTTTGCAGGCTGCCGGAAGGGAACTGTTCCGGGTGTTGCTTACTTACC GTCTGGAATCGGAGCATCTGCTGGAGGAAATGAAAGCGATGGTGGATGAGGAAATTGAGGGGAAGGAGGAGCTGTCTGCA GGACAGATGATGGATATTGTCCGGGGAATGCGGGAAGCCCTGCAATCCGGAAGCCGCCCCTTTCCAGCGGAAAGGCCTCC GGAAGACAGGGTTTCCGGGATGTAG
Upstream 100 bases:
>100_bases GCGCTGGATTTGGGTTGATTTTCCGGCGTTTTTCATGTAATGGCTGACCGCAATGGTCCATATTCGGGAATGCATGAGGA GGTGGCTGCCGTTTGTCATA
Downstream 100 bases:
>100_bases CGGCTTTTCATGGATGGCATGCCGGTACCGTGAGGAATCTTGTGGAGGCATGCCGGAAGTCCGCTCCGGCTATTCCGGAA GGAAAATGGATTAAGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASV DMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSA GQMMDIVRGMREALQSGSRPFPAERPPEDRVSGM
Sequences:
>Translated_194_residues MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASV DMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSA GQMMDIVRGMREALQSGSRPFPAERPPEDRVSGM >Mature_193_residues AASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASVD MDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAG QMMDIVRGMREALQSGSRPFPAERPPEDRVSGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21676; Mature: 21545
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAEST CCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GDEAVHLAAEISFRRYLASVDMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQ CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAGQMMDIVRGMREALQSGSRP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FPAERPPEDRVSGM CCCCCCCCCCCCCC >Mature Secondary Structure AASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAEST CCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GDEAVHLAAEISFRRYLASVDMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQ CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAGQMMDIVRGMREALQSGSRP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC FPAERPPEDRVSGM CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA