Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735561

Identifier: 187735561

GI number: 187735561

Start: 1272982

End: 1273566

Strand: Direct

Name: 187735561

Synonym: Amuc_1066

Alternate gene names: NA

Gene position: 1272982-1273566 (Clockwise)

Preceding gene: 187735552

Following gene: 187735563

Centisome position: 47.78

GC content: 57.26

Gene sequence:

>585_bases
ATGGCGGCTTCCCTGGGTGTGTCTCCCGCCCAGGATGTGGCGAGCCCCGATGCCGCGGATCTGGATTTGGACCTGGTCAA
ACTGAAAAGTGGCCCCAAGGGCAGACAGAGGGAGGCCATGAGGAAGGTCCTCCTGCTTGTGCATCTGAAGCAAAAGGAAA
CGTGGCTGGCGGAATCCACGGGGGATGAGGCCGTGCATCTGGCGGCGGAGATTTCCTTCCGCCGGTATTTGGCTTCAGTG
GATATGGACGGATGCCCGGAGGAATTCAGGCGCGCTTTCCTGCGGTATGCAAAGCTCCTGAATTCCTTTGAAGAAAAAGA
TTTGAACAGTGTCGCGGATTTTCCTGCGGTCCCTTTGCAGGCTGCCGGAAGGGAACTGTTCCGGGTGTTGCTTACTTACC
GTCTGGAATCGGAGCATCTGCTGGAGGAAATGAAAGCGATGGTGGATGAGGAAATTGAGGGGAAGGAGGAGCTGTCTGCA
GGACAGATGATGGATATTGTCCGGGGAATGCGGGAAGCCCTGCAATCCGGAAGCCGCCCCTTTCCAGCGGAAAGGCCTCC
GGAAGACAGGGTTTCCGGGATGTAG

Upstream 100 bases:

>100_bases
GCGCTGGATTTGGGTTGATTTTCCGGCGTTTTTCATGTAATGGCTGACCGCAATGGTCCATATTCGGGAATGCATGAGGA
GGTGGCTGCCGTTTGTCATA

Downstream 100 bases:

>100_bases
CGGCTTTTCATGGATGGCATGCCGGTACCGTGAGGAATCTTGTGGAGGCATGCCGGAAGTCCGCTCCGGCTATTCCGGAA
GGAAAATGGATTAAGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASV
DMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSA
GQMMDIVRGMREALQSGSRPFPAERPPEDRVSGM

Sequences:

>Translated_194_residues
MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASV
DMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSA
GQMMDIVRGMREALQSGSRPFPAERPPEDRVSGM
>Mature_193_residues
AASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAESTGDEAVHLAAEISFRRYLASVD
MDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQAAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAG
QMMDIVRGMREALQSGSRPFPAERPPEDRVSGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21676; Mature: 21545

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAEST
CCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDEAVHLAAEISFRRYLASVDMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQ
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAGQMMDIVRGMREALQSGSRP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FPAERPPEDRVSGM
CCCCCCCCCCCCCC
>Mature Secondary Structure 
AASLGVSPAQDVASPDAADLDLDLVKLKSGPKGRQREAMRKVLLLVHLKQKETWLAEST
CCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDEAVHLAAEISFRRYLASVDMDGCPEEFRRAFLRYAKLLNSFEEKDLNSVADFPAVPLQ
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
AAGRELFRVLLTYRLESEHLLEEMKAMVDEEIEGKEELSAGQMMDIVRGMREALQSGSRP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FPAERPPEDRVSGM
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA