Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735556

Identifier: 187735556

GI number: 187735556

Start: 1267418

End: 1268698

Strand: Reverse

Name: 187735556

Synonym: Amuc_1061

Alternate gene names: NA

Gene position: 1268698-1267418 (Counterclockwise)

Preceding gene: 187735557

Following gene: 187735555

Centisome position: 47.62

GC content: 57.85

Gene sequence:

>1281_bases
ATGAAATCCACACCATTCTTCGCCGGAATAGGCCTGGCAGCCCTGCTTAGCTCATGCAGCGTCTACCACAGCGCGCCTAT
CGACCTGAACGCGGAGGAAGCCTCCTGGAAAGAGGCATCCCGCGTAGATTCCCCTACCTCAATCACTCAGAACCAGGCTC
GCCAGATCGGCCTGGTCATGAATCCGGATCTGAACAAAGCCCGGCTGAAACTGGCTTCCAGCAATGAAGTAGCCAGGCAA
TCGGGCTGGTGGAACGATCCCTCCTTTTCCTGGGATATTGAACAAGTCCTCCAGGAAAATACGGTCAACATGTCCGGCAG
CCTGGGCTTCACCATTCCCGTAACCGGCCTCCCCGCCCTGGAAAAAAAAGTGGCGGAACAATACAAGGAGGCCGACTTCT
GGACCCTCCGCCAGGCTGAACTGGATTTTCTCAGTTCCCTGGACCAAGCATGGAGCCAACTGGCCGTTACCCAGCGCCGC
AAGACGGTCATCCGGGAACGGCTGGATGCCATCCGACGGGAAAACGGCATGATTGAACAGCTTATCGGCGCGGGGGAAGT
GGATTTTTCCTCTCGGCAGGTAGCCTCCCAGCGGATGAATGACGCTATCCGGGAACTCCAAACCGTGACGGAAACGGAAT
TGGAGCAGAAGATGGAACTCGTCAAGCTGATGGGCCTGCATCCTTCTGCGGTGCGGAAACTCGGTTTCCTGACGAAACAG
AGTTTCCAGCTTCCCGCCGCCGTACCGGCTCCCGGCCCTTCAGCCTTGACCGCCTCTCCAAAAATCAAGGCACAACTGGC
GACCTACGCCACCACGGAGACATTATTCAAAACGGAAATCCGCCGGCAGTACCCGGAACTGGAGCTCGGCCCCTCCTTCA
CCCGCGACGAAGGAGAAAAGGAAGTAGGCGGAGAAATAGGGTTCAATCTTCCCCTTTGGAACCGCAACCGCAAGGCTATT
GCGGAAGCCCGAGGCACACGGGACTTGTCCAGACAGGAAACCATCCAGCTTTGGAAAACGGAATTATTCAACGCCCGCCA
GCTTGACGCAAGCCAGCAGATGGCGCTCCGCCACTGCCGCACGGAACTCCAGCGCATGGAATCCTTCGCCGCCTCCGTCC
GGACCATGGAAAAGCTGCACGGCATTGGGGAAGCATCCCTGCTGGAACTGGCGGAAAACCGCCACCAGCTTTACGAAAGC
CGCCTGGCTTTCCTGGACAATCTGGACAAGCTTCTGGCCGTTCAGGCCCAGCTCCGCTACCTCACCCACGCCAACCTTTA
A

Upstream 100 bases:

>100_bases
TGCCTTTAATACGGCGGCCGCTTTTATTTGTTTCCGCGGAATTATTCGCCGCATTGTCCAAACCTGATTGGAGCGAACTG
TTTTTATTATCTTTTCCATC

Downstream 100 bases:

>100_bases
TCCACATCAACCCTCCACCATCTTTAATGAATATGAAACATCTTTATTTTTCCATCATGCTGGGACTGGCTCCTGCTTTC
TGTCTCCATTCCGCACGCGG

Product: Outer membrane protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKSTPFFAGIGLAALLSSCSVYHSAPIDLNAEEASWKEASRVDSPTSITQNQARQIGLVMNPDLNKARLKLASSNEVARQ
SGWWNDPSFSWDIEQVLQENTVNMSGSLGFTIPVTGLPALEKKVAEQYKEADFWTLRQAELDFLSSLDQAWSQLAVTQRR
KTVIRERLDAIRRENGMIEQLIGAGEVDFSSRQVASQRMNDAIRELQTVTETELEQKMELVKLMGLHPSAVRKLGFLTKQ
SFQLPAAVPAPGPSALTASPKIKAQLATYATTETLFKTEIRRQYPELELGPSFTRDEGEKEVGGEIGFNLPLWNRNRKAI
AEARGTRDLSRQETIQLWKTELFNARQLDASQQMALRHCRTELQRMESFAASVRTMEKLHGIGEASLLELAENRHQLYES
RLAFLDNLDKLLAVQAQLRYLTHANL

Sequences:

>Translated_426_residues
MKSTPFFAGIGLAALLSSCSVYHSAPIDLNAEEASWKEASRVDSPTSITQNQARQIGLVMNPDLNKARLKLASSNEVARQ
SGWWNDPSFSWDIEQVLQENTVNMSGSLGFTIPVTGLPALEKKVAEQYKEADFWTLRQAELDFLSSLDQAWSQLAVTQRR
KTVIRERLDAIRRENGMIEQLIGAGEVDFSSRQVASQRMNDAIRELQTVTETELEQKMELVKLMGLHPSAVRKLGFLTKQ
SFQLPAAVPAPGPSALTASPKIKAQLATYATTETLFKTEIRRQYPELELGPSFTRDEGEKEVGGEIGFNLPLWNRNRKAI
AEARGTRDLSRQETIQLWKTELFNARQLDASQQMALRHCRTELQRMESFAASVRTMEKLHGIGEASLLELAENRHQLYES
RLAFLDNLDKLLAVQAQLRYLTHANL
>Mature_426_residues
MKSTPFFAGIGLAALLSSCSVYHSAPIDLNAEEASWKEASRVDSPTSITQNQARQIGLVMNPDLNKARLKLASSNEVARQ
SGWWNDPSFSWDIEQVLQENTVNMSGSLGFTIPVTGLPALEKKVAEQYKEADFWTLRQAELDFLSSLDQAWSQLAVTQRR
KTVIRERLDAIRRENGMIEQLIGAGEVDFSSRQVASQRMNDAIRELQTVTETELEQKMELVKLMGLHPSAVRKLGFLTKQ
SFQLPAAVPAPGPSALTASPKIKAQLATYATTETLFKTEIRRQYPELELGPSFTRDEGEKEVGGEIGFNLPLWNRNRKAI
AEARGTRDLSRQETIQLWKTELFNARQLDASQQMALRHCRTELQRMESFAASVRTMEKLHGIGEASLLELAENRHQLYES
RLAFLDNLDKLLAVQAQLRYLTHANL

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47902; Mature: 47902

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTPFFAGIGLAALLSSCSVYHSAPIDLNAEEASWKEASRVDSPTSITQNQARQIGLVM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEE
NPDLNKARLKLASSNEVARQSGWWNDPSFSWDIEQVLQENTVNMSGSLGFTIPVTGLPAL
CCCCCHHHEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHH
EKKVAEQYKEADFWTLRQAELDFLSSLDQAWSQLAVTQRRKTVIRERLDAIRRENGMIEQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LIGAGEVDFSSRQVASQRMNDAIRELQTVTETELEQKMELVKLMGLHPSAVRKLGFLTKQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SFQLPAAVPAPGPSALTASPKIKAQLATYATTETLFKTEIRRQYPELELGPSFTRDEGEK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
EVGGEIGFNLPLWNRNRKAIAEARGTRDLSRQETIQLWKTELFNARQLDASQQMALRHCR
HCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH
TELQRMESFAASVRTMEKLHGIGEASLLELAENRHQLYESRLAFLDNLDKLLAVQAQLRY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTHANL
HHHCCC
>Mature Secondary Structure
MKSTPFFAGIGLAALLSSCSVYHSAPIDLNAEEASWKEASRVDSPTSITQNQARQIGLVM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCEEE
NPDLNKARLKLASSNEVARQSGWWNDPSFSWDIEQVLQENTVNMSGSLGFTIPVTGLPAL
CCCCCHHHEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCHHH
EKKVAEQYKEADFWTLRQAELDFLSSLDQAWSQLAVTQRRKTVIRERLDAIRRENGMIEQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LIGAGEVDFSSRQVASQRMNDAIRELQTVTETELEQKMELVKLMGLHPSAVRKLGFLTKQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SFQLPAAVPAPGPSALTASPKIKAQLATYATTETLFKTEIRRQYPELELGPSFTRDEGEK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
EVGGEIGFNLPLWNRNRKAIAEARGTRDLSRQETIQLWKTELFNARQLDASQQMALRHCR
HCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHH
TELQRMESFAASVRTMEKLHGIGEASLLELAENRHQLYESRLAFLDNLDKLLAVQAQLRY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTHANL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA